RNA–Protein interactions for RNA: ENST00000411374.2

RNU6-1304P-201, Transcript of RNA, U6 small nuclear 1304, pseudogene, humanhuman

BASIC

Gene RNU6-1304P, Length 106 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1304P-201ENST00000411374 AEBP2Q6ZN18 517 aaPredicted RBP19.57■□□□□ 0.72
RNU6-1304P-201ENST00000411374 CHIC1Q5VXU3 224 aa18.89■□□□□ 0.61
RNU6-1304P-201ENST00000411374 SENP3Q9H4L4 574 aaPredicted RBP17.02■□□□□ 0.32
RNU6-1304P-201ENST00000411374 PHF23Q9BUL5 403 aaPredicted RBP16.66■□□□□ 0.26
RNU6-1304P-201ENST00000411374 FOXD1Q16676 465 aa15.62■□□□□ 0.09
RNU6-1304P-201ENST00000411374 PLPPR3Q6T4P5 718 aa15.25■□□□□ 0.03
RNU6-1304P-201ENST00000411374 MSH5O43196 834 aa14.88□□□□□ -0.03
RNU6-1304P-201ENST00000411374 PIAS4Q8N2W9 510 aaPredicted RBP14.71□□□□□ -0.05
RNU6-1304P-201ENST00000411374 ADRA2BP18089 450 aa14.55□□□□□ -0.08
RNU6-1304P-201ENST00000411374 PPP6R1Q9UPN7 881 aa14.55□□□□□ -0.08
RNU6-1304P-201ENST00000411374 POTEDQ86YR6 584 aa14.12□□□□□ -0.15
RNU6-1304P-201ENST00000411374 SCAF1Q9H7N4 1312 aaKnown RBP13.75□□□□□ -0.21
RNU6-1304P-201ENST00000411374 DMRT2Q9Y5R5 561 aa13.43□□□□□ -0.26
RNU6-1304P-201ENST00000411374 MAPK8IP2Q13387 824 aaPredicted RBP13.28□□□□□ -0.28
RNU6-1304P-201ENST00000411374 PPP4R3CPQ6ZMV5 832 aa13.26□□□□□ -0.29
RNU6-1304P-201ENST00000411374 CNKSR2Q8WXI2 1034 aa13.11□□□□□ -0.31
RNU6-1304P-201ENST00000411374 NCBP3Q53F19 620 aaKnown RBP13.01□□□□□ -0.33
RNU6-1304P-201ENST00000411374 HOXD11P31277 338 aaPredicted RBP12.99□□□□□ -0.33
RNU6-1304P-201ENST00000411374 RNF216Q9NWF9 866 aaPredicted RBP12.96□□□□□ -0.33
RNU6-1304P-201ENST00000411374 DCAF8L1A6NGE4 600 aa12.83□□□□□ -0.36
RNU6-1304P-201ENST00000411374 DNAJC5BQ9UF47 199 aa12.76□□□□□ -0.37
RNU6-1304P-201ENST00000411374 CACNB1Q02641 598 aaPredicted RBP12.6□□□□□ -0.39
RNU6-1304P-201ENST00000411374 RNF39Q9H2S5 420 aa12.55□□□□□ -0.4
RNU6-1304P-201ENST00000411374 NPM3O75607 178 aaKnown RBP12.53□□□□□ -0.4
RNU6-1304P-201ENST00000411374 C1QBPQ07021 282 aaKnown RBP12.52□□□□□ -0.41
RNU6-1304P-201ENST00000411374 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.4□□□□□ -0.42
RNU6-1304P-201ENST00000411374 KCNA4P22459 653 aa12.28□□□□□ -0.44
RNU6-1304P-201ENST00000411374 APLP2Q06481 763 aa12.13□□□□□ -0.47
RNU6-1304P-201ENST00000411374 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.07□□□□□ -0.48
RNU6-1304P-201ENST00000411374 HNRNPUL2Q1KMD3 747 aaKnown RBP12.07□□□□□ -0.48
RNU6-1304P-201ENST00000411374 U3KPZ7 1027 aaPredicted RBP12.01□□□□□ -0.49
RNU6-1304P-201ENST00000411374 SAMD1Q6SPF0 538 aaPredicted RBP11.91□□□□□ -0.5
RNU6-1304P-201ENST00000411374 CAPN15O75808 1086 aa11.88□□□□□ -0.51
RNU6-1304P-201ENST00000411374 SLC4A2P04920 1241 aa11.88□□□□□ -0.51
RNU6-1304P-201ENST00000411374 ZNF219Q9P2Y4 722 aaPredicted RBP11.84□□□□□ -0.51
RNU6-1304P-201ENST00000411374 SLC4A1APQ9BWU0 796 aaKnown RBP11.76□□□□□ -0.53
RNU6-1304P-201ENST00000411374 MYCNP04198 464 aaPredicted RBP11.75□□□□□ -0.53
RNU6-1304P-201ENST00000411374 DSG3P32926 999 aa11.74□□□□□ -0.53
RNU6-1304P-201ENST00000411374 SPINK5Q9NQ38 1064 aaPredicted RBP11.73□□□□□ -0.53
RNU6-1304P-201ENST00000411374 TRHP20396 242 aaPredicted RBP11.66□□□□□ -0.54
RNU6-1304P-201ENST00000411374 FOXD4L1Q9NU39 408 aa11.64□□□□□ -0.55
RNU6-1304P-201ENST00000411374 RBM42Q9BTD8 480 aaKnown RBP11.47□□□□□ -0.57
RNU6-1304P-201ENST00000411374 ABCB7O75027 752 aa11.46□□□□□ -0.57
RNU6-1304P-201ENST00000411374 ZBTB12Q9Y330 459 aaPredicted RBP11.44□□□□□ -0.58
RNU6-1304P-201ENST00000411374 ATXN8OSP0DMR3 200 aa11.41□□□□□ -0.58
RNU6-1304P-201ENST00000411374 POLA2Q14181 598 aa11.38□□□□□ -0.59
RNU6-1304P-201ENST00000411374 ZBTB22O15209 634 aa11.18□□□□□ -0.62
RNU6-1304P-201ENST00000411374 POTEHQ6S545 545 aa11.15□□□□□ -0.62
RNU6-1304P-201ENST00000411374 ATF5Q9Y2D1 282 aaPredicted RBP11.15□□□□□ -0.62
RNU6-1304P-201ENST00000411374 AKT1S1Q96B36 256 aa11.12□□□□□ -0.63
RNU6-1304P-201ENST00000411374 FBLN2P98095 1184 aa11.1□□□□□ -0.63
RNU6-1304P-201ENST00000411374 CHRDL2Q6WN34 429 aa10.98□□□□□ -0.65
RNU6-1304P-201ENST00000411374 SPDYE2BA6NHP3 402 aa10.97□□□□□ -0.65
RNU6-1304P-201ENST00000411374 SPDYE6P0CI01 402 aa10.97□□□□□ -0.65
RNU6-1304P-201ENST00000411374 SPDYE2Q495Y8 402 aa10.97□□□□□ -0.65
RNU6-1304P-201ENST00000411374 OSCARQ8IYS5 282 aa10.94□□□□□ -0.66
RNU6-1304P-201ENST00000411374 REM2Q8IYK8 340 aaPredicted RBP10.88□□□□□ -0.67
RNU6-1304P-201ENST00000411374 CSRNP3Q8WYN3 585 aa10.85□□□□□ -0.67
RNU6-1304P-201ENST00000411374 ZNF692Q9BU19 519 aaPredicted RBP10.78□□□□□ -0.68
RNU6-1304P-201ENST00000411374 SPDYE1Q8NFV5 336 aaPredicted RBP10.77□□□□□ -0.69
RNU6-1304P-201ENST00000411374 SSUH2Q9Y2M2 353 aa10.73□□□□□ -0.69
RNU6-1304P-201ENST00000411374 EHMT2Q96KQ7 1210 aa10.72□□□□□ -0.69
RNU6-1304P-201ENST00000411374 PITPNM1O00562 1244 aa10.71□□□□□ -0.69
RNU6-1304P-201ENST00000411374 MKRN4PQ13434 485 aaPredicted RBP10.7□□□□□ -0.7
RNU6-1304P-201ENST00000411374 FXR2P51116 673 aaKnown RBP eCLIP10.68□□□□□ -0.7
RNU6-1304P-201ENST00000411374 PIP4P2Q8N4L2 257 aa10.67□□□□□ -0.7
RNU6-1304P-201ENST00000411374 CLEC11AQ9Y240 323 aa10.6□□□□□ -0.71
RNU6-1304P-201ENST00000411374 PABPN1Q86U42 306 aaKnown RBP eCLIP10.56□□□□□ -0.72
RNU6-1304P-201ENST00000411374 STAG3Q9UJ98 1225 aa10.54□□□□□ -0.72
RNU6-1304P-201ENST00000411374 HAX1O00165 279 aa10.53□□□□□ -0.72
RNU6-1304P-201ENST00000411374 PRR29P0C7W0 189 aa10.53□□□□□ -0.72
RNU6-1304P-201ENST00000411374 SP7Q8TDD2 431 aaPredicted RBP10.53□□□□□ -0.72
RNU6-1304P-201ENST00000411374 PRKAR2AP13861 404 aaKnown RBP10.49□□□□□ -0.73
RNU6-1304P-201ENST00000411374 SPDYE4A6NLX3 237 aa10.42□□□□□ -0.74
RNU6-1304P-201ENST00000411374 CLCN6P51797 869 aa10.4□□□□□ -0.74
RNU6-1304P-201ENST00000411374 C19orf67A6NJJ6 358 aa10.33□□□□□ -0.76
RNU6-1304P-201ENST00000411374 FARP1Q9Y4F1 1045 aaPredicted RBP10.27□□□□□ -0.77
RNU6-1304P-201ENST00000411374 CHADLQ6NUI6 762 aa10.25□□□□□ -0.77
RNU6-1304P-201ENST00000411374 NPM1P06748 294 aaKnown RBP eCLIP10.22□□□□□ -0.77
RNU6-1304P-201ENST00000411374 PAK3O75914 559 aaPredicted RBP10.2□□□□□ -0.78
RNU6-1304P-201ENST00000411374 PLEKHG5O94827 1062 aa10.2□□□□□ -0.78
RNU6-1304P-201ENST00000411374 CD44P16070 742 aaKnown RBP10.19□□□□□ -0.78
RNU6-1304P-201ENST00000411374 PROM2Q8N271 834 aa10.15□□□□□ -0.78
RNU6-1304P-201ENST00000411374 EVX2Q03828 476 aa10.14□□□□□ -0.79
RNU6-1304P-201ENST00000411374 CREBZFQ9NS37 354 aa10.14□□□□□ -0.79
RNU6-1304P-201ENST00000411374 GABBR2O75899 941 aa10.13□□□□□ -0.79
RNU6-1304P-201ENST00000411374 ZNF579Q8NAF0 562 aaKnown RBP10.08□□□□□ -0.8
RNU6-1304P-201ENST00000411374 ZBTB47Q9UFB7 747 aaPredicted RBP10.05□□□□□ -0.8
RNU6-1304P-201ENST00000411374 ZRANB1Q9UGI0 708 aa10.05□□□□□ -0.8
RNU6-1304P-201ENST00000411374 DCBLD2Q96PD2 775 aa10□□□□□ -0.81
RNU6-1304P-201ENST00000411374 MIER1Q8N108 512 aa9.96□□□□□ -0.82
RNU6-1304P-201ENST00000411374 FBXO3Q9UK99 471 aa9.96□□□□□ -0.82
RNU6-1304P-201ENST00000411374 MNX1P50219 401 aaPredicted RBP9.94□□□□□ -0.82
RNU6-1304P-201ENST00000411374 PLCD3Q8N3E9 789 aa9.92□□□□□ -0.82
RNU6-1304P-201ENST00000411374 FKBP8Q14318 412 aa9.9□□□□□ -0.82
RNU6-1304P-201ENST00000411374 LHX8Q68G74 356 aa9.86□□□□□ -0.83
RNU6-1304P-201ENST00000411374 SGIP1Q9BQI5 828 aa9.8□□□□□ -0.84
RNU6-1304P-201ENST00000411374 PHF12Q96QT6 1004 aa9.79□□□□□ -0.84
RNU6-1304P-201ENST00000411374 TSPYL2Q9H2G4 693 aaPredicted RBP9.79□□□□□ -0.84
RNU6-1304P-201ENST00000411374 GALR2O43603 387 aaPredicted RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms