RNA–Protein interactions for RNA: ENST00000549888.1

AC011611.2-201, humanhuman

TSL 3 BASIC

Gene AC011611.2, Length 358 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011611.2-201ENST00000549888 AEBP2Q6ZN18 517 aaPredicted RBP19.29■□□□□ 0.68
AC011611.2-201ENST00000549888 CHIC1Q5VXU3 224 aa18.47■□□□□ 0.55
AC011611.2-201ENST00000549888 SENP3Q9H4L4 574 aaPredicted RBP16.61■□□□□ 0.25
AC011611.2-201ENST00000549888 PHF23Q9BUL5 403 aaPredicted RBP16.3■□□□□ 0.2
AC011611.2-201ENST00000549888 FOXD1Q16676 465 aa15.36■□□□□ 0.05
AC011611.2-201ENST00000549888 PLPPR3Q6T4P5 718 aa14.82□□□□□ -0.04
AC011611.2-201ENST00000549888 MSH5O43196 834 aa14.5□□□□□ -0.09
AC011611.2-201ENST00000549888 PIAS4Q8N2W9 510 aaPredicted RBP14.37□□□□□ -0.11
AC011611.2-201ENST00000549888 PPP6R1Q9UPN7 881 aa14.32□□□□□ -0.12
AC011611.2-201ENST00000549888 ADRA2BP18089 450 aa14.28□□□□□ -0.12
AC011611.2-201ENST00000549888 POTEDQ86YR6 584 aa13.94□□□□□ -0.18
AC011611.2-201ENST00000549888 SCAF1Q9H7N4 1312 aaKnown RBP13.28□□□□□ -0.28
AC011611.2-201ENST00000549888 DMRT2Q9Y5R5 561 aa13.16□□□□□ -0.3
AC011611.2-201ENST00000549888 MAPK8IP2Q13387 824 aaPredicted RBP13.06□□□□□ -0.32
AC011611.2-201ENST00000549888 PPP4R3CPQ6ZMV5 832 aa12.92□□□□□ -0.34
AC011611.2-201ENST00000549888 CNKSR2Q8WXI2 1034 aa12.74□□□□□ -0.37
AC011611.2-201ENST00000549888 HOXD11P31277 338 aaPredicted RBP12.71□□□□□ -0.37
AC011611.2-201ENST00000549888 RNF216Q9NWF9 866 aaPredicted RBP12.63□□□□□ -0.39
AC011611.2-201ENST00000549888 NCBP3Q53F19 620 aaKnown RBP12.54□□□□□ -0.4
AC011611.2-201ENST00000549888 DCAF8L1A6NGE4 600 aa12.46□□□□□ -0.41
AC011611.2-201ENST00000549888 DNAJC5BQ9UF47 199 aa12.43□□□□□ -0.42
AC011611.2-201ENST00000549888 RNF39Q9H2S5 420 aa12.32□□□□□ -0.44
AC011611.2-201ENST00000549888 CACNB1Q02641 598 aaPredicted RBP12.3□□□□□ -0.44
AC011611.2-201ENST00000549888 NPM3O75607 178 aaKnown RBP12.24□□□□□ -0.45
AC011611.2-201ENST00000549888 C1QBPQ07021 282 aaKnown RBP12.21□□□□□ -0.45
AC011611.2-201ENST00000549888 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.03□□□□□ -0.48
AC011611.2-201ENST00000549888 KCNA4P22459 653 aa11.99□□□□□ -0.49
AC011611.2-201ENST00000549888 U3KPZ7 1027 aaPredicted RBP11.78□□□□□ -0.52
AC011611.2-201ENST00000549888 SLC4A2P04920 1241 aa11.66□□□□□ -0.54
AC011611.2-201ENST00000549888 APLP2Q06481 763 aa11.65□□□□□ -0.54
AC011611.2-201ENST00000549888 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.62□□□□□ -0.55
AC011611.2-201ENST00000549888 HNRNPUL2Q1KMD3 747 aaKnown RBP11.62□□□□□ -0.55
AC011611.2-201ENST00000549888 CAPN15O75808 1086 aa11.55□□□□□ -0.56
AC011611.2-201ENST00000549888 DSG3P32926 999 aa11.52□□□□□ -0.57
AC011611.2-201ENST00000549888 SPINK5Q9NQ38 1064 aaPredicted RBP11.52□□□□□ -0.57
AC011611.2-201ENST00000549888 SAMD1Q6SPF0 538 aaPredicted RBP11.51□□□□□ -0.57
AC011611.2-201ENST00000549888 ZNF219Q9P2Y4 722 aaPredicted RBP11.48□□□□□ -0.57
AC011611.2-201ENST00000549888 MYCNP04198 464 aaPredicted RBP11.41□□□□□ -0.58
AC011611.2-201ENST00000549888 SLC4A1APQ9BWU0 796 aaKnown RBP11.39□□□□□ -0.59
AC011611.2-201ENST00000549888 TRHP20396 242 aaPredicted RBP11.33□□□□□ -0.6
AC011611.2-201ENST00000549888 FOXD4L1Q9NU39 408 aa11.28□□□□□ -0.6
AC011611.2-201ENST00000549888 ABCB7O75027 752 aa11.21□□□□□ -0.61
AC011611.2-201ENST00000549888 RBM42Q9BTD8 480 aaKnown RBP11.11□□□□□ -0.63
AC011611.2-201ENST00000549888 POLA2Q14181 598 aa11.08□□□□□ -0.64
AC011611.2-201ENST00000549888 ZBTB12Q9Y330 459 aaPredicted RBP11.05□□□□□ -0.64
AC011611.2-201ENST00000549888 ATXN8OSP0DMR3 200 aa11.04□□□□□ -0.64
AC011611.2-201ENST00000549888 ZBTB22O15209 634 aa10.99□□□□□ -0.65
AC011611.2-201ENST00000549888 POTEHQ6S545 545 aa10.96□□□□□ -0.65
AC011611.2-201ENST00000549888 ATF5Q9Y2D1 282 aaPredicted RBP10.96□□□□□ -0.65
AC011611.2-201ENST00000549888 AKT1S1Q96B36 256 aa10.82□□□□□ -0.68
AC011611.2-201ENST00000549888 CHRDL2Q6WN34 429 aa10.74□□□□□ -0.69
AC011611.2-201ENST00000549888 FBLN2P98095 1184 aa10.71□□□□□ -0.69
AC011611.2-201ENST00000549888 OSCARQ8IYS5 282 aa10.71□□□□□ -0.69
AC011611.2-201ENST00000549888 SPDYE2BA6NHP3 402 aa10.65□□□□□ -0.7
AC011611.2-201ENST00000549888 SPDYE6P0CI01 402 aa10.65□□□□□ -0.7
AC011611.2-201ENST00000549888 SPDYE2Q495Y8 402 aa10.65□□□□□ -0.7
AC011611.2-201ENST00000549888 REM2Q8IYK8 340 aaPredicted RBP10.64□□□□□ -0.71
AC011611.2-201ENST00000549888 EHMT2Q96KQ7 1210 aa10.61□□□□□ -0.71
AC011611.2-201ENST00000549888 CSRNP3Q8WYN3 585 aa10.56□□□□□ -0.72
AC011611.2-201ENST00000549888 MKRN4PQ13434 485 aaPredicted RBP10.52□□□□□ -0.73
AC011611.2-201ENST00000549888 PITPNM1O00562 1244 aa10.5□□□□□ -0.73
AC011611.2-201ENST00000549888 SSUH2Q9Y2M2 353 aa10.48□□□□□ -0.73
AC011611.2-201ENST00000549888 PIP4P2Q8N4L2 257 aa10.47□□□□□ -0.73
AC011611.2-201ENST00000549888 FXR2P51116 673 aaKnown RBP eCLIP10.46□□□□□ -0.73
AC011611.2-201ENST00000549888 SPDYE1Q8NFV5 336 aaPredicted RBP10.44□□□□□ -0.74
AC011611.2-201ENST00000549888 ZNF692Q9BU19 519 aaPredicted RBP10.44□□□□□ -0.74
AC011611.2-201ENST00000549888 SP7Q8TDD2 431 aaPredicted RBP10.32□□□□□ -0.76
AC011611.2-201ENST00000549888 CLEC11AQ9Y240 323 aa10.27□□□□□ -0.77
AC011611.2-201ENST00000549888 PABPN1Q86U42 306 aaKnown RBP eCLIP10.26□□□□□ -0.77
AC011611.2-201ENST00000549888 HAX1O00165 279 aa10.25□□□□□ -0.77
AC011611.2-201ENST00000549888 PRKAR2AP13861 404 aaKnown RBP10.23□□□□□ -0.77
AC011611.2-201ENST00000549888 PRR29P0C7W0 189 aa10.19□□□□□ -0.78
AC011611.2-201ENST00000549888 STAG3Q9UJ98 1225 aa10.14□□□□□ -0.79
AC011611.2-201ENST00000549888 C19orf67A6NJJ6 358 aa10.13□□□□□ -0.79
AC011611.2-201ENST00000549888 SPDYE4A6NLX3 237 aa10.09□□□□□ -0.79
AC011611.2-201ENST00000549888 EVX2Q03828 476 aa10.04□□□□□ -0.8
AC011611.2-201ENST00000549888 CHADLQ6NUI6 762 aa10.03□□□□□ -0.8
AC011611.2-201ENST00000549888 CLCN6P51797 869 aa10.02□□□□□ -0.81
AC011611.2-201ENST00000549888 FARP1Q9Y4F1 1045 aaPredicted RBP10.01□□□□□ -0.81
AC011611.2-201ENST00000549888 PROM2Q8N271 834 aa9.94□□□□□ -0.82
AC011611.2-201ENST00000549888 CD44P16070 742 aaKnown RBP9.93□□□□□ -0.82
AC011611.2-201ENST00000549888 CREBZFQ9NS37 354 aa9.93□□□□□ -0.82
AC011611.2-201ENST00000549888 GABBR2O75899 941 aa9.91□□□□□ -0.82
AC011611.2-201ENST00000549888 NPM1P06748 294 aaKnown RBP eCLIP9.84□□□□□ -0.83
AC011611.2-201ENST00000549888 ZNF579Q8NAF0 562 aaKnown RBP9.84□□□□□ -0.83
AC011611.2-201ENST00000549888 PAK3O75914 559 aaPredicted RBP9.8□□□□□ -0.84
AC011611.2-201ENST00000549888 MNX1P50219 401 aaPredicted RBP9.77□□□□□ -0.85
AC011611.2-201ENST00000549888 ZRANB1Q9UGI0 708 aa9.77□□□□□ -0.85
AC011611.2-201ENST00000549888 PLEKHG5O94827 1062 aa9.71□□□□□ -0.86
AC011611.2-201ENST00000549888 DCBLD2Q96PD2 775 aa9.68□□□□□ -0.86
AC011611.2-201ENST00000549888 POTEIP0CG38 1075 aa9.66□□□□□ -0.86
AC011611.2-201ENST00000549888 LHX8Q68G74 356 aa9.65□□□□□ -0.86
AC011611.2-201ENST00000549888 ZBTB47Q9UFB7 747 aaPredicted RBP9.62□□□□□ -0.87
AC011611.2-201ENST00000549888 GALR2O43603 387 aaPredicted RBP9.6□□□□□ -0.87
AC011611.2-201ENST00000549888 MIER1Q8N108 512 aa9.6□□□□□ -0.87
AC011611.2-201ENST00000549888 PHF12Q96QT6 1004 aa9.59□□□□□ -0.87
AC011611.2-201ENST00000549888 FKBP8Q14318 412 aa9.56□□□□□ -0.88
AC011611.2-201ENST00000549888 CCDC61Q9Y6R9 512 aa9.55□□□□□ -0.88
AC011611.2-201ENST00000549888 PLCD3Q8N3E9 789 aa9.54□□□□□ -0.88
AC011611.2-201ENST00000549888 FBXO3Q9UK99 471 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms