Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 AKR1C1-202ENST00000380872 6705 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
RNF39Q9H2S5 PBRM1-203ENST00000356770 7523 ntAPPRIS ALT1 TSL 1 (best) BASIC7.74□□□□□ -1.17
RNF39Q9H2S5 DOCK5-201ENST00000276440 10075 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
RNF39Q9H2S5 ZNF207-207ENST00000577908 4672 ntAPPRIS ALT1 TSL 5 BASIC7.74□□□□□ -1.17
RNF39Q9H2S5 ATM-215ENST00000530958 5718 ntTSL 2 BASIC7.74□□□□□ -1.17
RNF39Q9H2S5 AC093616.1-201ENST00000427434 2095 ntBASIC7.74□□□□□ -1.17
RNF39Q9H2S5 PLXDC2-203ENST00000377252 12468 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
RNF39Q9H2S5 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
RNF39Q9H2S5 GABRQ-201ENST00000598523 6172 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
RNF39Q9H2S5 LMO7-205ENST00000377534 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
RNF39Q9H2S5 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC7.73□□□□□ -1.17
RNF39Q9H2S5 PLEKHA5-201ENST00000299275 4238 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
RNF39Q9H2S5 NRXN3-201ENST00000281127 8504 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
RNF39Q9H2S5 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC7.73□□□□□ -1.17
RNF39Q9H2S5 RNU4-82P-201ENST00000362443 140 ntBASIC7.73□□□□□ -1.17
RNF39Q9H2S5 RNU6-72P-201ENST00000384285 79 ntBASIC7.73□□□□□ -1.17
RNF39Q9H2S5 RNY1P4-201ENST00000384595 115 ntBASIC7.73□□□□□ -1.17
RNF39Q9H2S5 RNU6-816P-201ENST00000390914 107 ntBASIC7.73□□□□□ -1.17
RNF39Q9H2S5 RNU6-1268P-201ENST00000391214 107 ntBASIC7.73□□□□□ -1.17
RNF39Q9H2S5 RNU6-1239P-201ENST00000391310 107 ntBASIC7.73□□□□□ -1.17
RNF39Q9H2S5 SSXP9-201ENST00000417503 292 ntBASIC7.73□□□□□ -1.17
RNF39Q9H2S5 AP000705.1-201ENST00000454567 350 ntBASIC7.73□□□□□ -1.17
RNF39Q9H2S5 RPS23P7-201ENST00000466210 444 ntBASIC7.73□□□□□ -1.17
RNF39Q9H2S5 AC016632.1-201ENST00000503994 196 ntBASIC7.73□□□□□ -1.17
RNF39Q9H2S5 HIGD1AP3-201ENST00000515857 278 ntBASIC7.73□□□□□ -1.17
RNF39Q9H2S5 AC107016.1-201ENST00000550463 337 ntBASIC7.73□□□□□ -1.17
RNF39Q9H2S5 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC7.73□□□□□ -1.17
RNF39Q9H2S5 AC008507.4-201ENST00000585464 127 ntBASIC7.73□□□□□ -1.17
RNF39Q9H2S5 AL021707.8-201ENST00000609428 183 ntBASIC7.73□□□□□ -1.17
RNF39Q9H2S5 GRIA3-204ENST00000541091 2740 ntAPPRIS P5 TSL 1 (best) BASIC7.73□□□□□ -1.17
RNF39Q9H2S5 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC7.73□□□□□ -1.17
RNF39Q9H2S5 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC7.73□□□□□ -1.17
RNF39Q9H2S5 HIST1H2BN-203ENST00000606613 4137 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
RNF39Q9H2S5 FAM13C-216ENST00000618427 3458 ntAPPRIS ALT2 TSL 2 BASIC7.73□□□□□ -1.17
RNF39Q9H2S5 CPS1-IT1-201ENST00000628368 2306 ntBASIC7.73□□□□□ -1.17
RNF39Q9H2S5 AL162171.3-201ENST00000617439 3178 ntBASIC7.73□□□□□ -1.17
RNF39Q9H2S5 DSG3-201ENST00000257189 5525 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
RNF39Q9H2S5 VANGL1-204ENST00000369510 8647 ntAPPRIS ALT1 TSL 1 (best) BASIC7.73□□□□□ -1.17
RNF39Q9H2S5 APOB-201ENST00000233242 14121 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
RNF39Q9H2S5 SCN8A-203ENST00000545061 11433 ntTSL 5 BASIC7.72□□□□□ -1.17
RNF39Q9H2S5 GOLGB1-209ENST00000614479 11115 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
RNF39Q9H2S5 ABHD3-205ENST00000578270 2080 ntTSL 5 BASIC7.72□□□□□ -1.17
RNF39Q9H2S5 ZNF658-206ENST00000621410 4025 ntAPPRIS P1 TSL 2 BASIC7.72□□□□□ -1.17
RNF39Q9H2S5 KIAA1324L-203ENST00000416314 3179 ntAPPRIS P3 TSL 2 BASIC7.72□□□□□ -1.17
RNF39Q9H2S5 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
RNF39Q9H2S5 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
RNF39Q9H2S5 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC7.72□□□□□ -1.17
RNF39Q9H2S5 GCNT1-202ENST00000442371 5972 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
RNF39Q9H2S5 RNASE9-209ENST00000557068 2703 ntAPPRIS P3 TSL 2 BASIC7.72□□□□□ -1.17
RNF39Q9H2S5 SNORA18.3-201ENST00000384122 132 ntBASIC7.72□□□□□ -1.17
RNF39Q9H2S5 EIF4A1P3-201ENST00000411521 244 ntBASIC7.72□□□□□ -1.17
RNF39Q9H2S5 RPL31P2-201ENST00000413849 377 ntBASIC7.72□□□□□ -1.17
RNF39Q9H2S5 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC7.72□□□□□ -1.17
RNF39Q9H2S5 EIF4HP2-201ENST00000424380 563 ntBASIC7.72□□□□□ -1.17
RNF39Q9H2S5 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC7.72□□□□□ -1.17
RNF39Q9H2S5 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC7.72□□□□□ -1.17
RNF39Q9H2S5 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC7.72□□□□□ -1.17
RNF39Q9H2S5 CARSP2-201ENST00000520688 277 ntBASIC7.72□□□□□ -1.17
RNF39Q9H2S5 AL356575.1-201ENST00000603008 283 ntBASIC7.72□□□□□ -1.17
RNF39Q9H2S5 PACRG-210ENST00000611387 279 ntTSL 5 BASIC7.72□□□□□ -1.17
RNF39Q9H2S5 RN7SL126P-201ENST00000616400 299 ntBASIC7.72□□□□□ -1.17
RNF39Q9H2S5 AL138693.1-201ENST00000622219 129 ntBASIC7.72□□□□□ -1.17
RNF39Q9H2S5 NLRP9-201ENST00000332836 3484 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
RNF39Q9H2S5 KLHL2-209ENST00000514860 2442 ntAPPRIS ALT2 TSL 2 BASIC7.72□□□□□ -1.17
RNF39Q9H2S5 DIO2-210ENST00000557010 6367 ntAPPRIS P1 TSL 2 BASIC7.72□□□□□ -1.17
RNF39Q9H2S5 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC7.72□□□□□ -1.17
RNF39Q9H2S5 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC7.72□□□□□ -1.17
RNF39Q9H2S5 HUS1-201ENST00000258774 2935 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
RNF39Q9H2S5 AC113615.1-201ENST00000507424 4121 ntTSL 2 BASIC7.71□□□□□ -1.17
RNF39Q9H2S5 CNOT7-201ENST00000361272 6913 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
RNF39Q9H2S5 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
RNF39Q9H2S5 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC7.71□□□□□ -1.17
RNF39Q9H2S5 ZC3H8-202ENST00000409573 5965 ntAPPRIS P2 TSL 5 BASIC7.71□□□□□ -1.17
RNF39Q9H2S5 BTK-202ENST00000372880 2248 ntTSL 2 BASIC7.71□□□□□ -1.17
RNF39Q9H2S5 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC7.71□□□□□ -1.17
RNF39Q9H2S5 PEX19-201ENST00000368072 3661 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
RNF39Q9H2S5 OR2F1-203ENST00000641412 4829 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
RNF39Q9H2S5 RNU6-339P-201ENST00000384310 107 ntBASIC7.71□□□□□ -1.18
RNF39Q9H2S5 RPL18AP14-201ENST00000417685 526 ntBASIC7.71□□□□□ -1.18
RNF39Q9H2S5 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC7.71□□□□□ -1.18
RNF39Q9H2S5 RPL23AP46-201ENST00000438548 490 ntBASIC7.71□□□□□ -1.18
RNF39Q9H2S5 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC7.71□□□□□ -1.18
RNF39Q9H2S5 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC7.71□□□□□ -1.18
RNF39Q9H2S5 PPIAP32-201ENST00000449940 472 ntBASIC7.71□□□□□ -1.18
RNF39Q9H2S5 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC7.71□□□□□ -1.18
RNF39Q9H2S5 SNRPGP7-201ENST00000469016 106 ntBASIC7.71□□□□□ -1.18
RNF39Q9H2S5 AC072052.1-201ENST00000496556 306 ntBASIC7.71□□□□□ -1.18
RNF39Q9H2S5 RN7SKP11-201ENST00000517018 287 ntBASIC7.71□□□□□ -1.18
RNF39Q9H2S5 AC090022.1-201ENST00000546569 311 ntBASIC7.71□□□□□ -1.18
RNF39Q9H2S5 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC7.71□□□□□ -1.18
RNF39Q9H2S5 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC7.71□□□□□ -1.18
RNF39Q9H2S5 AL355812.1-201ENST00000603215 216 ntBASIC7.71□□□□□ -1.18
RNF39Q9H2S5 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
RNF39Q9H2S5 AC244100.4-201ENST00000617747 388 ntBASIC7.71□□□□□ -1.18
RNF39Q9H2S5 ACO1-201ENST00000309951 7466 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
RNF39Q9H2S5 DPPA4-201ENST00000335658 2817 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.18
RNF39Q9H2S5 GRIA4-206ENST00000525187 2822 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
RNF39Q9H2S5 C18orf54-206ENST00000620105 5693 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
RNF39Q9H2S5 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC7.71□□□□□ -1.18
RNF39Q9H2S5 SUPT6H-201ENST00000314616 6523 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms