Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 NRXN3-215ENST00000557594 3381 ntTSL 2 BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 CACNA1D-201ENST00000288139 9341 ntAPPRIS P3 TSL 1 (best) BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 TLR4-201ENST00000355622 4844 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 NAT10-201ENST00000257829 4002 ntAPPRIS P3 TSL 1 (best) BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 USP32P1-201ENST00000341745 3233 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 DGKG-202ENST00000344484 3445 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 GCNA-202ENST00000373696 2791 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 ZNF233-201ENST00000391958 2784 ntAPPRIS P1 TSL 2 BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 GPATCH11-202ENST00000409774 3906 ntAPPRIS P1 TSL 2 BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 TMEM136-204ENST00000529187 3930 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 LIMCH1-216ENST00000512820 5071 ntAPPRIS ALT2 TSL 1 (best) BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 HSP90AB1-204ENST00000620073 2644 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 ERC1-202ENST00000355446 5796 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 WBP1L-201ENST00000369889 4107 ntAPPRIS P3 TSL 1 (best) BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 GRIN2A-205ENST00000535259 4118 ntTSL 5 BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 POLR2J3-215ENST00000511313 4630 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 LIG3-202ENST00000378526 8400 ntAPPRIS P4 TSL 1 (best) BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 RORB-202ENST00000396204 2996 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 RUBCNL-206ENST00000409879 2997 ntAPPRIS ALT2 TSL 2 BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 ETS1-202ENST00000392668 5139 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 HEATR4-201ENST00000334988 3469 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 PPM1L-205ENST00000498165 10934 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 TMCC1-202ENST00000426664 5484 ntTSL 5 BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 ATP1A2-202ENST00000392233 3338 ntTSL 5 BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 PTPN14-205ENST00000543945 3842 ntTSL 5 BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 TMEM108-211ENST00000515826 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 AC025678.3-201ENST00000623619 4824 ntBASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 AC087280.2-201ENST00000637205 4822 ntTSL 5 BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 RNF185-202ENST00000326132 3171 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 MCTP1-202ENST00000429576 3159 ntAPPRIS ALT2 TSL 2 BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 OR9M1P-202ENST00000641564 3163 ntBASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 ADGRL3-214ENST00000511324 5042 ntTSL 5 BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 MACROD2-202ENST00000378058 4025 ntTSL 2 BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 MFSD8-217ENST00000641178 4374 ntBASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 FAM13A-205ENST00000503556 3386 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 MAPK10-338ENST00000641647 3362 ntBASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 DAAM1-201ENST00000360909 4227 ntAPPRIS ALT2 TSL 1 (best) BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 MTPN-201ENST00000393085 3738 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 ZFAND4-202ENST00000344646 3241 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC1.6□□□□□ -2.15
KRTAP4-4Q9BYR3 GABRP-203ENST00000518525 3576 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
KRTAP4-4Q9BYR3 ZNF3-207ENST00000424697 2718 ntAPPRIS P1 TSL 3 BASIC1.6□□□□□ -2.15
KRTAP4-4Q9BYR3 AL354984.1-201ENST00000371169 1854 ntTSL 2 BASIC1.6□□□□□ -2.15
KRTAP4-4Q9BYR3 DHFR2-201ENST00000314636 3927 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
KRTAP4-4Q9BYR3 LRRC2-202ENST00000395905 5100 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
KRTAP4-4Q9BYR3 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC1.6□□□□□ -2.15
KRTAP4-4Q9BYR3 DLG2-201ENST00000280241 7730 ntAPPRIS ALT2 TSL 5 BASIC1.6□□□□□ -2.15
KRTAP4-4Q9BYR3 NLGN4Y-203ENST00000382868 5338 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
KRTAP4-4Q9BYR3 WDR47-205ENST00000400794 4134 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
KRTAP4-4Q9BYR3 AC105233.5-202ENST00000642083 4132 ntBASIC1.6□□□□□ -2.15
KRTAP4-4Q9BYR3 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
KRTAP4-4Q9BYR3 MRRF-202ENST00000344641 9826 ntAPPRIS P1 TSL 2 BASIC1.6□□□□□ -2.15
KRTAP4-4Q9BYR3 ZNF215-202ENST00000414517 3257 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
KRTAP4-4Q9BYR3 C9orf131-205ENST00000421362 3259 ntAPPRIS ALT2 TSL 4 BASIC1.6□□□□□ -2.15
KRTAP4-4Q9BYR3 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC1.6□□□□□ -2.15
KRTAP4-4Q9BYR3 MAPK10-205ENST00000395160 2448 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
KRTAP4-4Q9BYR3 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
KRTAP4-4Q9BYR3 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.6□□□□□ -2.15
KRTAP4-4Q9BYR3 MAP4K4-220ENST00000627726 3135 ntTSL 5 BASIC1.6□□□□□ -2.15
KRTAP4-4Q9BYR3 TRIM66-202ENST00000402157 10086 ntAPPRIS P5 TSL 5 BASIC1.6□□□□□ -2.15
KRTAP4-4Q9BYR3 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
KRTAP4-4Q9BYR3 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC1.6□□□□□ -2.15
KRTAP4-4Q9BYR3 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC1.6□□□□□ -2.15
KRTAP4-4Q9BYR3 ZNF468-201ENST00000243639 4027 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
KRTAP4-4Q9BYR3 CD86-201ENST00000264468 2634 ntAPPRIS ALT2 TSL 5 BASIC1.6□□□□□ -2.15
KRTAP4-4Q9BYR3 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
KRTAP4-4Q9BYR3 ENTPD1-203ENST00000371207 1903 ntTSL 2 BASIC1.6□□□□□ -2.15
KRTAP4-4Q9BYR3 SEPT2-206ENST00000402092 3333 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
KRTAP4-4Q9BYR3 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC1.6□□□□□ -2.15
KRTAP4-4Q9BYR3 ZMYND8-219ENST00000611941 5090 ntAPPRIS ALT2 TSL 1 (best) BASIC1.6□□□□□ -2.15
KRTAP4-4Q9BYR3 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC1.6□□□□□ -2.15
KRTAP4-4Q9BYR3 UNC5D-206ENST00000453357 7002 ntAPPRIS ALT2 TSL 1 (best) BASIC1.6□□□□□ -2.15
KRTAP4-4Q9BYR3 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
KRTAP4-4Q9BYR3 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
KRTAP4-4Q9BYR3 AC131280.1-202ENST00000624067 4211 ntBASIC1.6□□□□□ -2.15
KRTAP4-4Q9BYR3 ZNF544-201ENST00000269829 3547 ntAPPRIS P3 TSL 1 (best) BASIC1.6□□□□□ -2.15
KRTAP4-4Q9BYR3 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
KRTAP4-4Q9BYR3 AL591379.1-201ENST00000315293 3739 ntTSL 2 BASIC1.6□□□□□ -2.15
KRTAP4-4Q9BYR3 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC1.6□□□□□ -2.15
KRTAP4-4Q9BYR3 CD109-202ENST00000422508 9221 ntAPPRIS ALT1 TSL 1 (best) BASIC1.6□□□□□ -2.15
KRTAP4-4Q9BYR3 KIF9-202ENST00000335044 3357 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms