Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGB6Q9Y5F9 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGB6Q9Y5F9 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
PCDHGB6Q9Y5F9 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGB6Q9Y5F9 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.12■□□□□ 0.49
PCDHGB6Q9Y5F9 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGB6Q9Y5F9 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGB6Q9Y5F9 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGB6Q9Y5F9 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGB6Q9Y5F9 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGB6Q9Y5F9 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
PCDHGB6Q9Y5F9 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGB6Q9Y5F9 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.11■□□□□ 0.49
PCDHGB6Q9Y5F9 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGB6Q9Y5F9 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
PCDHGB6Q9Y5F9 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGB6Q9Y5F9 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGB6Q9Y5F9 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGB6Q9Y5F9 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGB6Q9Y5F9 FAM210CP-201ENST00000445714 574 ntBASIC18.11■□□□□ 0.49
PCDHGB6Q9Y5F9 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.11■□□□□ 0.49
PCDHGB6Q9Y5F9 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
PCDHGB6Q9Y5F9 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.11■□□□□ 0.49
PCDHGB6Q9Y5F9 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.11■□□□□ 0.49
PCDHGB6Q9Y5F9 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGB6Q9Y5F9 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.11■□□□□ 0.49
PCDHGB6Q9Y5F9 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.11■□□□□ 0.49
PCDHGB6Q9Y5F9 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.11■□□□□ 0.49
PCDHGB6Q9Y5F9 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGB6Q9Y5F9 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGB6Q9Y5F9 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGB6Q9Y5F9 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
PCDHGB6Q9Y5F9 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.11■□□□□ 0.49
PCDHGB6Q9Y5F9 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGB6Q9Y5F9 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGB6Q9Y5F9 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGB6Q9Y5F9 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGB6Q9Y5F9 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGB6Q9Y5F9 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGB6Q9Y5F9 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGB6Q9Y5F9 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDHGB6Q9Y5F9 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDHGB6Q9Y5F9 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGB6Q9Y5F9 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGB6Q9Y5F9 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDHGB6Q9Y5F9 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.1■□□□□ 0.49
PCDHGB6Q9Y5F9 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGB6Q9Y5F9 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGB6Q9Y5F9 AC087499.1-201ENST00000418141 1075 ntBASIC18.1■□□□□ 0.49
PCDHGB6Q9Y5F9 KSR1P1-201ENST00000446298 240 ntBASIC18.1■□□□□ 0.49
PCDHGB6Q9Y5F9 AP002982.1-201ENST00000492365 877 ntBASIC18.1■□□□□ 0.49
PCDHGB6Q9Y5F9 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDHGB6Q9Y5F9 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
PCDHGB6Q9Y5F9 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.1■□□□□ 0.49
PCDHGB6Q9Y5F9 AC012306.2-201ENST00000609350 630 ntBASIC18.1■□□□□ 0.49
PCDHGB6Q9Y5F9 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGB6Q9Y5F9 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGB6Q9Y5F9 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGB6Q9Y5F9 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGB6Q9Y5F9 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGB6Q9Y5F9 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDHGB6Q9Y5F9 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.09■□□□□ 0.49
PCDHGB6Q9Y5F9 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDHGB6Q9Y5F9 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGB6Q9Y5F9 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
PCDHGB6Q9Y5F9 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
PCDHGB6Q9Y5F9 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
PCDHGB6Q9Y5F9 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGB6Q9Y5F9 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
PCDHGB6Q9Y5F9 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGB6Q9Y5F9 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGB6Q9Y5F9 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDHGB6Q9Y5F9 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGB6Q9Y5F9 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGB6Q9Y5F9 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGB6Q9Y5F9 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.09■□□□□ 0.49
PCDHGB6Q9Y5F9 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGB6Q9Y5F9 NUDT16P1-203ENST00000513809 620 ntBASIC18.09■□□□□ 0.49
PCDHGB6Q9Y5F9 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.09■□□□□ 0.49
PCDHGB6Q9Y5F9 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGB6Q9Y5F9 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGB6Q9Y5F9 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDHGB6Q9Y5F9 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.09■□□□□ 0.49
PCDHGB6Q9Y5F9 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGB6Q9Y5F9 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGB6Q9Y5F9 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDHGB6Q9Y5F9 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.08■□□□□ 0.49
PCDHGB6Q9Y5F9 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
PCDHGB6Q9Y5F9 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDHGB6Q9Y5F9 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
PCDHGB6Q9Y5F9 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PCDHGB6Q9Y5F9 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDHGB6Q9Y5F9 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PCDHGB6Q9Y5F9 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDHGB6Q9Y5F9 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDHGB6Q9Y5F9 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.08■□□□□ 0.49
PCDHGB6Q9Y5F9 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHGB6Q9Y5F9 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHGB6Q9Y5F9 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
PCDHGB6Q9Y5F9 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 308.4 ms