Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00588Q9Y4M8 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00588Q9Y4M8 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00588Q9Y4M8 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00588Q9Y4M8 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00588Q9Y4M8 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00588Q9Y4M8 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00588Q9Y4M8 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00588Q9Y4M8 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC13.15□□□□□ -0.3
LINC00588Q9Y4M8 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00588Q9Y4M8 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC13.15□□□□□ -0.3
LINC00588Q9Y4M8 HMGA1P5-201ENST00000412453 271 ntBASIC13.15□□□□□ -0.3
LINC00588Q9Y4M8 AC007663.1-201ENST00000438948 1240 ntBASIC13.15□□□□□ -0.3
LINC00588Q9Y4M8 TSPY17P-201ENST00000450329 467 ntBASIC13.15□□□□□ -0.3
LINC00588Q9Y4M8 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC13.15□□□□□ -0.3
LINC00588Q9Y4M8 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC13.15□□□□□ -0.3
LINC00588Q9Y4M8 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC13.15□□□□□ -0.3
LINC00588Q9Y4M8 CFL2-205ENST00000555765 632 ntTSL 2 BASIC13.15□□□□□ -0.3
LINC00588Q9Y4M8 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
LINC00588Q9Y4M8 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00588Q9Y4M8 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC13.15□□□□□ -0.3
LINC00588Q9Y4M8 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00588Q9Y4M8 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC13.15□□□□□ -0.31
LINC00588Q9Y4M8 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC13.15□□□□□ -0.31
LINC00588Q9Y4M8 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
LINC00588Q9Y4M8 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC13.14□□□□□ -0.31
LINC00588Q9Y4M8 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC13.14□□□□□ -0.31
LINC00588Q9Y4M8 AC092338.2-201ENST00000568827 1415 ntBASIC13.14□□□□□ -0.31
LINC00588Q9Y4M8 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC13.14□□□□□ -0.31
LINC00588Q9Y4M8 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00588Q9Y4M8 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00588Q9Y4M8 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00588Q9Y4M8 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00588Q9Y4M8 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00588Q9Y4M8 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
LINC00588Q9Y4M8 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00588Q9Y4M8 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC13.14□□□□□ -0.31
LINC00588Q9Y4M8 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00588Q9Y4M8 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00588Q9Y4M8 CA15P1-201ENST00000481698 905 ntBASIC13.14□□□□□ -0.31
LINC00588Q9Y4M8 AL049597.2-201ENST00000565575 961 ntBASIC13.14□□□□□ -0.31
LINC00588Q9Y4M8 AL353719.1-201ENST00000566847 864 ntBASIC13.14□□□□□ -0.31
LINC00588Q9Y4M8 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
LINC00588Q9Y4M8 AL023803.3-201ENST00000615559 522 ntBASIC13.14□□□□□ -0.31
LINC00588Q9Y4M8 AC010653.2-201ENST00000623505 997 ntBASIC13.14□□□□□ -0.31
LINC00588Q9Y4M8 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00588Q9Y4M8 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC13.14□□□□□ -0.31
LINC00588Q9Y4M8 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC13.14□□□□□ -0.31
LINC00588Q9Y4M8 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00588Q9Y4M8 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00588Q9Y4M8 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC13.13□□□□□ -0.31
LINC00588Q9Y4M8 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
LINC00588Q9Y4M8 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00588Q9Y4M8 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00588Q9Y4M8 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
LINC00588Q9Y4M8 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC13.13□□□□□ -0.31
LINC00588Q9Y4M8 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC13.13□□□□□ -0.31
LINC00588Q9Y4M8 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00588Q9Y4M8 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00588Q9Y4M8 TREX1-205ENST00000625293 1783 ntBASIC13.13□□□□□ -0.31
LINC00588Q9Y4M8 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00588Q9Y4M8 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00588Q9Y4M8 LGALS8-AS1-201ENST00000487567 1457 ntBASIC13.13□□□□□ -0.31
LINC00588Q9Y4M8 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00588Q9Y4M8 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00588Q9Y4M8 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00588Q9Y4M8 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
LINC00588Q9Y4M8 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
LINC00588Q9Y4M8 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
LINC00588Q9Y4M8 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00588Q9Y4M8 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00588Q9Y4M8 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00588Q9Y4M8 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00588Q9Y4M8 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC13.13□□□□□ -0.31
LINC00588Q9Y4M8 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC13.13□□□□□ -0.31
LINC00588Q9Y4M8 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00588Q9Y4M8 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00588Q9Y4M8 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC13.13□□□□□ -0.31
LINC00588Q9Y4M8 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00588Q9Y4M8 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC13.13□□□□□ -0.31
LINC00588Q9Y4M8 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC13.13□□□□□ -0.31
LINC00588Q9Y4M8 GPX4-207ENST00000589115 812 ntTSL 2 BASIC13.13□□□□□ -0.31
LINC00588Q9Y4M8 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC13.13□□□□□ -0.31
LINC00588Q9Y4M8 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC13.13□□□□□ -0.31
LINC00588Q9Y4M8 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00588Q9Y4M8 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC13.13□□□□□ -0.31
LINC00588Q9Y4M8 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00588Q9Y4M8 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00588Q9Y4M8 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC13.13□□□□□ -0.31
LINC00588Q9Y4M8 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00588Q9Y4M8 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
LINC00588Q9Y4M8 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00588Q9Y4M8 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00588Q9Y4M8 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00588Q9Y4M8 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00588Q9Y4M8 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00588Q9Y4M8 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC13.13□□□□□ -0.31
LINC00588Q9Y4M8 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
LINC00588Q9Y4M8 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC13.12□□□□□ -0.31
LINC00588Q9Y4M8 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms