Protein–RNA interactions for Protein: Q9Y2K6

USP20, Ubiquitin carboxyl-terminal hydrolase 20, humanhuman

Predictions only

Length 914 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP20Q9Y2K6 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
USP20Q9Y2K6 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC21.06■□□□□ 0.96
USP20Q9Y2K6 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
USP20Q9Y2K6 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
USP20Q9Y2K6 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC21.06■□□□□ 0.96
USP20Q9Y2K6 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC21.06■□□□□ 0.96
USP20Q9Y2K6 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC21.06■□□□□ 0.96
USP20Q9Y2K6 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC21.06■□□□□ 0.96
USP20Q9Y2K6 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC21.06■□□□□ 0.96
USP20Q9Y2K6 GLDC-219ENST00000640208 420 ntTSL 2 BASIC21.06■□□□□ 0.96
USP20Q9Y2K6 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
USP20Q9Y2K6 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
USP20Q9Y2K6 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
USP20Q9Y2K6 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC21.06■□□□□ 0.96
USP20Q9Y2K6 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
USP20Q9Y2K6 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC21.06■□□□□ 0.96
USP20Q9Y2K6 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
USP20Q9Y2K6 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
USP20Q9Y2K6 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
USP20Q9Y2K6 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
USP20Q9Y2K6 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC21.05■□□□□ 0.96
USP20Q9Y2K6 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
USP20Q9Y2K6 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
USP20Q9Y2K6 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
USP20Q9Y2K6 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC21.05■□□□□ 0.96
USP20Q9Y2K6 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
USP20Q9Y2K6 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC21.05■□□□□ 0.96
USP20Q9Y2K6 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC21.05■□□□□ 0.96
USP20Q9Y2K6 MFAP1P1-201ENST00000442257 1255 ntBASIC21.05■□□□□ 0.96
USP20Q9Y2K6 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC21.05■□□□□ 0.96
USP20Q9Y2K6 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC21.05■□□□□ 0.96
USP20Q9Y2K6 AC097493.4-201ENST00000641197 219 ntBASIC21.05■□□□□ 0.96
USP20Q9Y2K6 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
USP20Q9Y2K6 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.05■□□□□ 0.96
USP20Q9Y2K6 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
USP20Q9Y2K6 KRT8P11-201ENST00000409686 1436 ntBASIC21.04■□□□□ 0.96
USP20Q9Y2K6 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP20Q9Y2K6 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP20Q9Y2K6 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
USP20Q9Y2K6 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
USP20Q9Y2K6 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP20Q9Y2K6 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC21.04■□□□□ 0.96
USP20Q9Y2K6 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP20Q9Y2K6 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC21.04■□□□□ 0.96
USP20Q9Y2K6 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC21.04■□□□□ 0.96
USP20Q9Y2K6 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP20Q9Y2K6 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
USP20Q9Y2K6 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC21.04■□□□□ 0.96
USP20Q9Y2K6 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC21.04■□□□□ 0.96
USP20Q9Y2K6 LINC01023-201ENST00000606054 436 ntBASIC21.04■□□□□ 0.96
USP20Q9Y2K6 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC21.04■□□□□ 0.96
USP20Q9Y2K6 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP20Q9Y2K6 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP20Q9Y2K6 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP20Q9Y2K6 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
USP20Q9Y2K6 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
USP20Q9Y2K6 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP20Q9Y2K6 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC21.04■□□□□ 0.96
USP20Q9Y2K6 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
USP20Q9Y2K6 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP20Q9Y2K6 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
USP20Q9Y2K6 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
USP20Q9Y2K6 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
USP20Q9Y2K6 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
USP20Q9Y2K6 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC21.03■□□□□ 0.96
USP20Q9Y2K6 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
USP20Q9Y2K6 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
USP20Q9Y2K6 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC21.03■□□□□ 0.96
USP20Q9Y2K6 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
USP20Q9Y2K6 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
USP20Q9Y2K6 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
USP20Q9Y2K6 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
USP20Q9Y2K6 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
USP20Q9Y2K6 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC21.03■□□□□ 0.96
USP20Q9Y2K6 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
USP20Q9Y2K6 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC21.03■□□□□ 0.96
USP20Q9Y2K6 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC21.03■□□□□ 0.96
USP20Q9Y2K6 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC21.03■□□□□ 0.96
USP20Q9Y2K6 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC21.03■□□□□ 0.96
USP20Q9Y2K6 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC21.03■□□□□ 0.96
USP20Q9Y2K6 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC21.03■□□□□ 0.96
USP20Q9Y2K6 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC21.03■□□□□ 0.96
USP20Q9Y2K6 DGCR10-201ENST00000609839 495 ntBASIC21.03■□□□□ 0.96
USP20Q9Y2K6 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
USP20Q9Y2K6 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
USP20Q9Y2K6 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
USP20Q9Y2K6 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
USP20Q9Y2K6 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC21.03■□□□□ 0.96
USP20Q9Y2K6 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC21.03■□□□□ 0.96
USP20Q9Y2K6 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC21.03■□□□□ 0.96
USP20Q9Y2K6 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
USP20Q9Y2K6 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC21.03■□□□□ 0.96
USP20Q9Y2K6 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
USP20Q9Y2K6 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
USP20Q9Y2K6 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC21.02■□□□□ 0.96
USP20Q9Y2K6 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
USP20Q9Y2K6 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC21.02■□□□□ 0.96
USP20Q9Y2K6 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
USP20Q9Y2K6 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC21.02■□□□□ 0.96
USP20Q9Y2K6 LINC01568-207ENST00000641790 1380 ntBASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms