Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CNTN3Q9P232 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
CNTN3Q9P232 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNTN3Q9P232 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.66■□□□□ 0.9
CNTN3Q9P232 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNTN3Q9P232 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNTN3Q9P232 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNTN3Q9P232 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNTN3Q9P232 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNTN3Q9P232 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CNTN3Q9P232 TMPOP1-202ENST00000424642 1267 ntBASIC20.66■□□□□ 0.9
CNTN3Q9P232 AL137013.1-201ENST00000432946 1228 ntBASIC20.66■□□□□ 0.9
CNTN3Q9P232 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CNTN3Q9P232 TSPY17P-201ENST00000450329 467 ntBASIC20.66■□□□□ 0.9
CNTN3Q9P232 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC20.66■□□□□ 0.9
CNTN3Q9P232 AC010203.1-204ENST00000548782 407 ntBASIC20.66■□□□□ 0.9
CNTN3Q9P232 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
CNTN3Q9P232 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNTN3Q9P232 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNTN3Q9P232 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNTN3Q9P232 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CNTN3Q9P232 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNTN3Q9P232 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.66■□□□□ 0.9
CNTN3Q9P232 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CNTN3Q9P232 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CNTN3Q9P232 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
CNTN3Q9P232 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNTN3Q9P232 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNTN3Q9P232 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNTN3Q9P232 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNTN3Q9P232 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CNTN3Q9P232 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.65■□□□□ 0.9
CNTN3Q9P232 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.65■□□□□ 0.9
CNTN3Q9P232 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNTN3Q9P232 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNTN3Q9P232 Z82202.1-201ENST00000623446 1880 ntBASIC20.65■□□□□ 0.9
CNTN3Q9P232 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20.65■□□□□ 0.9
CNTN3Q9P232 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.65■□□□□ 0.9
CNTN3Q9P232 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.65■□□□□ 0.9
CNTN3Q9P232 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNTN3Q9P232 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.65■□□□□ 0.9
CNTN3Q9P232 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNTN3Q9P232 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNTN3Q9P232 HMGA1P5-201ENST00000412453 271 ntBASIC20.65■□□□□ 0.9
CNTN3Q9P232 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC20.65■□□□□ 0.9
CNTN3Q9P232 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CNTN3Q9P232 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNTN3Q9P232 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNTN3Q9P232 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.65■□□□□ 0.9
CNTN3Q9P232 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.64■□□□□ 0.9
CNTN3Q9P232 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC20.64■□□□□ 0.9
CNTN3Q9P232 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC20.64■□□□□ 0.9
CNTN3Q9P232 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.64■□□□□ 0.9
CNTN3Q9P232 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CNTN3Q9P232 AL158211.5-201ENST00000623583 2518 ntBASIC20.64■□□□□ 0.9
CNTN3Q9P232 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.64■□□□□ 0.9
CNTN3Q9P232 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CNTN3Q9P232 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CNTN3Q9P232 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CNTN3Q9P232 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC20.64■□□□□ 0.89
CNTN3Q9P232 KRT18P57-201ENST00000443599 1254 ntBASIC20.64■□□□□ 0.89
CNTN3Q9P232 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC20.64■□□□□ 0.89
CNTN3Q9P232 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CNTN3Q9P232 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CNTN3Q9P232 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.64■□□□□ 0.89
CNTN3Q9P232 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CNTN3Q9P232 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.64■□□□□ 0.89
CNTN3Q9P232 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CNTN3Q9P232 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.64■□□□□ 0.89
CNTN3Q9P232 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CNTN3Q9P232 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
CNTN3Q9P232 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CNTN3Q9P232 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
CNTN3Q9P232 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CNTN3Q9P232 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
CNTN3Q9P232 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CNTN3Q9P232 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CNTN3Q9P232 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
CNTN3Q9P232 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CNTN3Q9P232 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CNTN3Q9P232 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CNTN3Q9P232 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CNTN3Q9P232 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CNTN3Q9P232 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CNTN3Q9P232 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC20.63■□□□□ 0.89
CNTN3Q9P232 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC20.63■□□□□ 0.89
CNTN3Q9P232 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC20.63■□□□□ 0.89
CNTN3Q9P232 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CNTN3Q9P232 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CNTN3Q9P232 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CNTN3Q9P232 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CNTN3Q9P232 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CNTN3Q9P232 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CNTN3Q9P232 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CNTN3Q9P232 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CNTN3Q9P232 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CNTN3Q9P232 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CNTN3Q9P232 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC20.62■□□□□ 0.89
CNTN3Q9P232 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CNTN3Q9P232 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms