Protein–RNA interactions for Protein: Q9NW13

RBM28, RNA-binding protein 28, humanhuman

Known RBP Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28Q9NW13 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC22.28■■□□□ 1.16
RBM28Q9NW13 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
RBM28Q9NW13 STX6-204ENST00000542060 4809 ntTSL 2 BASIC22.28■■□□□ 1.16
RBM28Q9NW13 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
RBM28Q9NW13 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC22.28■■□□□ 1.16
RBM28Q9NW13 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
RBM28Q9NW13 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC22.28■■□□□ 1.16
RBM28Q9NW13 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC22.28■■□□□ 1.16
RBM28Q9NW13 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC22.27■■□□□ 1.16
RBM28Q9NW13 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
RBM28Q9NW13 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
RBM28Q9NW13 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RBM28Q9NW13 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC22.27■■□□□ 1.16
RBM28Q9NW13 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RBM28Q9NW13 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC22.27■■□□□ 1.16
RBM28Q9NW13 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
RBM28Q9NW13 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
RBM28Q9NW13 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
RBM28Q9NW13 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC22.27■■□□□ 1.16
RBM28Q9NW13 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
RBM28Q9NW13 PRSS44-201ENST00000515154 1146 ntBASIC22.27■■□□□ 1.16
RBM28Q9NW13 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC22.27■■□□□ 1.16
RBM28Q9NW13 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC22.27■■□□□ 1.16
RBM28Q9NW13 AP000692.2-201ENST00000608391 879 ntBASIC22.27■■□□□ 1.16
RBM28Q9NW13 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
RBM28Q9NW13 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
RBM28Q9NW13 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
RBM28Q9NW13 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC22.27■■□□□ 1.15
RBM28Q9NW13 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC22.27■■□□□ 1.15
RBM28Q9NW13 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC22.27■■□□□ 1.15
RBM28Q9NW13 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RBM28Q9NW13 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC22.26■■□□□ 1.15
RBM28Q9NW13 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC22.26■■□□□ 1.15
RBM28Q9NW13 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RBM28Q9NW13 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RBM28Q9NW13 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RBM28Q9NW13 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RBM28Q9NW13 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC22.26■■□□□ 1.15
RBM28Q9NW13 KRT8P11-201ENST00000409686 1436 ntBASIC22.26■■□□□ 1.15
RBM28Q9NW13 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC22.26■■□□□ 1.15
RBM28Q9NW13 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RBM28Q9NW13 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
RBM28Q9NW13 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RBM28Q9NW13 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
RBM28Q9NW13 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC22.26■■□□□ 1.15
RBM28Q9NW13 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC22.26■■□□□ 1.15
RBM28Q9NW13 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RBM28Q9NW13 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RBM28Q9NW13 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RBM28Q9NW13 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RBM28Q9NW13 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
RBM28Q9NW13 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC22.26■■□□□ 1.15
RBM28Q9NW13 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RBM28Q9NW13 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC22.26■■□□□ 1.15
RBM28Q9NW13 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC22.25■■□□□ 1.15
RBM28Q9NW13 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RBM28Q9NW13 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC22.25■■□□□ 1.15
RBM28Q9NW13 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RBM28Q9NW13 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
RBM28Q9NW13 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
RBM28Q9NW13 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC22.25■■□□□ 1.15
RBM28Q9NW13 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RBM28Q9NW13 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC22.25■■□□□ 1.15
RBM28Q9NW13 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC22.25■■□□□ 1.15
RBM28Q9NW13 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC22.25■■□□□ 1.15
RBM28Q9NW13 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
RBM28Q9NW13 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
RBM28Q9NW13 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC22.25■■□□□ 1.15
RBM28Q9NW13 GAS2L1P1-201ENST00000420145 1480 ntBASIC22.25■■□□□ 1.15
RBM28Q9NW13 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC22.25■■□□□ 1.15
RBM28Q9NW13 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RBM28Q9NW13 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RBM28Q9NW13 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC22.25■■□□□ 1.15
RBM28Q9NW13 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
RBM28Q9NW13 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
RBM28Q9NW13 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
RBM28Q9NW13 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
RBM28Q9NW13 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC22.24■■□□□ 1.15
RBM28Q9NW13 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC22.24■■□□□ 1.15
RBM28Q9NW13 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC22.24■■□□□ 1.15
RBM28Q9NW13 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
RBM28Q9NW13 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC22.24■■□□□ 1.15
RBM28Q9NW13 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC22.24■■□□□ 1.15
RBM28Q9NW13 GOLGA6L5P-202ENST00000515341 1828 ntBASIC22.24■■□□□ 1.15
RBM28Q9NW13 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC22.24■■□□□ 1.15
RBM28Q9NW13 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RBM28Q9NW13 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
RBM28Q9NW13 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RBM28Q9NW13 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
RBM28Q9NW13 PTGES2-AS1-201ENST00000443493 2100 ntBASIC22.24■■□□□ 1.15
RBM28Q9NW13 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC22.24■■□□□ 1.15
RBM28Q9NW13 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
RBM28Q9NW13 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RBM28Q9NW13 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
RBM28Q9NW13 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
RBM28Q9NW13 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
RBM28Q9NW13 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
RBM28Q9NW13 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RBM28Q9NW13 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC22.23■■□□□ 1.15
RBM28Q9NW13 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms