Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC23.41■■□□□ 1.34
ECHDC1Q9NTX5 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
ECHDC1Q9NTX5 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
ECHDC1Q9NTX5 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
ECHDC1Q9NTX5 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
ECHDC1Q9NTX5 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
ECHDC1Q9NTX5 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC23.41■■□□□ 1.34
ECHDC1Q9NTX5 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
ECHDC1Q9NTX5 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC23.41■■□□□ 1.34
ECHDC1Q9NTX5 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
ECHDC1Q9NTX5 KRT8P11-201ENST00000409686 1436 ntBASIC23.41■■□□□ 1.34
ECHDC1Q9NTX5 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
ECHDC1Q9NTX5 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC23.4■■□□□ 1.34
ECHDC1Q9NTX5 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
ECHDC1Q9NTX5 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
ECHDC1Q9NTX5 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
ECHDC1Q9NTX5 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
ECHDC1Q9NTX5 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
ECHDC1Q9NTX5 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC23.4■■□□□ 1.34
ECHDC1Q9NTX5 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC23.4■■□□□ 1.34
ECHDC1Q9NTX5 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC23.4■■□□□ 1.34
ECHDC1Q9NTX5 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC23.4■■□□□ 1.34
ECHDC1Q9NTX5 MIR4497-201ENST00000583208 89 ntBASIC23.4■■□□□ 1.34
ECHDC1Q9NTX5 MIR4785-201ENST00000585005 73 ntBASIC23.4■■□□□ 1.34
ECHDC1Q9NTX5 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC23.4■■□□□ 1.34
ECHDC1Q9NTX5 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC23.4■■□□□ 1.34
ECHDC1Q9NTX5 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
ECHDC1Q9NTX5 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
ECHDC1Q9NTX5 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
ECHDC1Q9NTX5 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC23.4■■□□□ 1.34
ECHDC1Q9NTX5 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
ECHDC1Q9NTX5 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC23.4■■□□□ 1.34
ECHDC1Q9NTX5 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
ECHDC1Q9NTX5 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC23.39■■□□□ 1.34
ECHDC1Q9NTX5 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
ECHDC1Q9NTX5 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC23.39■■□□□ 1.34
ECHDC1Q9NTX5 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.34
ECHDC1Q9NTX5 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.34
ECHDC1Q9NTX5 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
ECHDC1Q9NTX5 GAS2L1P1-201ENST00000420145 1480 ntBASIC23.39■■□□□ 1.34
ECHDC1Q9NTX5 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC23.39■■□□□ 1.34
ECHDC1Q9NTX5 IRX1P1-201ENST00000438849 1838 ntBASIC23.39■■□□□ 1.33
ECHDC1Q9NTX5 GOLGA6L5P-202ENST00000515341 1828 ntBASIC23.39■■□□□ 1.33
ECHDC1Q9NTX5 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
ECHDC1Q9NTX5 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
ECHDC1Q9NTX5 DHDH-203ENST00000522614 776 ntTSL 5 BASIC23.39■■□□□ 1.33
ECHDC1Q9NTX5 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC23.39■■□□□ 1.33
ECHDC1Q9NTX5 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC23.39■■□□□ 1.33
ECHDC1Q9NTX5 DECR2-212ENST00000627716 352 ntTSL 2 BASIC23.39■■□□□ 1.33
ECHDC1Q9NTX5 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
ECHDC1Q9NTX5 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
ECHDC1Q9NTX5 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
ECHDC1Q9NTX5 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
ECHDC1Q9NTX5 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
ECHDC1Q9NTX5 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
ECHDC1Q9NTX5 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC23.38■■□□□ 1.33
ECHDC1Q9NTX5 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC23.38■■□□□ 1.33
ECHDC1Q9NTX5 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC23.38■■□□□ 1.33
ECHDC1Q9NTX5 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
ECHDC1Q9NTX5 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
ECHDC1Q9NTX5 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC23.38■■□□□ 1.33
ECHDC1Q9NTX5 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
ECHDC1Q9NTX5 FAM207BP-201ENST00000447172 505 ntBASIC23.38■■□□□ 1.33
ECHDC1Q9NTX5 AP000692.2-201ENST00000608391 879 ntBASIC23.38■■□□□ 1.33
ECHDC1Q9NTX5 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
ECHDC1Q9NTX5 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC23.38■■□□□ 1.33
ECHDC1Q9NTX5 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
ECHDC1Q9NTX5 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
ECHDC1Q9NTX5 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
ECHDC1Q9NTX5 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
ECHDC1Q9NTX5 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
ECHDC1Q9NTX5 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC23.38■■□□□ 1.33
ECHDC1Q9NTX5 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC23.37■■□□□ 1.33
ECHDC1Q9NTX5 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
ECHDC1Q9NTX5 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
ECHDC1Q9NTX5 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC23.37■■□□□ 1.33
ECHDC1Q9NTX5 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC23.37■■□□□ 1.33
ECHDC1Q9NTX5 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
ECHDC1Q9NTX5 AL596275.1-201ENST00000423464 877 ntBASIC23.37■■□□□ 1.33
ECHDC1Q9NTX5 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC23.37■■□□□ 1.33
ECHDC1Q9NTX5 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
ECHDC1Q9NTX5 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC23.37■■□□□ 1.33
ECHDC1Q9NTX5 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
ECHDC1Q9NTX5 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
ECHDC1Q9NTX5 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
ECHDC1Q9NTX5 AL161938.1-201ENST00000569833 2180 ntBASIC23.37■■□□□ 1.33
ECHDC1Q9NTX5 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC23.37■■□□□ 1.33
ECHDC1Q9NTX5 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC23.37■■□□□ 1.33
ECHDC1Q9NTX5 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
ECHDC1Q9NTX5 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
ECHDC1Q9NTX5 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
ECHDC1Q9NTX5 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
ECHDC1Q9NTX5 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
ECHDC1Q9NTX5 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC23.36■■□□□ 1.33
ECHDC1Q9NTX5 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC23.36■■□□□ 1.33
ECHDC1Q9NTX5 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC23.36■■□□□ 1.33
ECHDC1Q9NTX5 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
ECHDC1Q9NTX5 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
ECHDC1Q9NTX5 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
ECHDC1Q9NTX5 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC23.36■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms