Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC16.65■□□□□ 0.26
PCDHB16Q9NRJ7 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.65■□□□□ 0.26
PCDHB16Q9NRJ7 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
PCDHB16Q9NRJ7 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
PCDHB16Q9NRJ7 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHB16Q9NRJ7 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHB16Q9NRJ7 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHB16Q9NRJ7 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHB16Q9NRJ7 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC16.65■□□□□ 0.26
PCDHB16Q9NRJ7 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC16.65■□□□□ 0.26
PCDHB16Q9NRJ7 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC16.65■□□□□ 0.26
PCDHB16Q9NRJ7 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHB16Q9NRJ7 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHB16Q9NRJ7 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHB16Q9NRJ7 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHB16Q9NRJ7 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHB16Q9NRJ7 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC16.65■□□□□ 0.26
PCDHB16Q9NRJ7 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
PCDHB16Q9NRJ7 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
PCDHB16Q9NRJ7 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHB16Q9NRJ7 MOK-233ENST00000524214 1539 ntTSL 2 BASIC16.65■□□□□ 0.26
PCDHB16Q9NRJ7 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHB16Q9NRJ7 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHB16Q9NRJ7 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHB16Q9NRJ7 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHB16Q9NRJ7 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
PCDHB16Q9NRJ7 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHB16Q9NRJ7 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHB16Q9NRJ7 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC16.64■□□□□ 0.25
PCDHB16Q9NRJ7 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.64■□□□□ 0.25
PCDHB16Q9NRJ7 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHB16Q9NRJ7 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.64■□□□□ 0.25
PCDHB16Q9NRJ7 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.64■□□□□ 0.25
PCDHB16Q9NRJ7 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHB16Q9NRJ7 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHB16Q9NRJ7 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHB16Q9NRJ7 GPX1P1-201ENST00000388829 606 ntBASIC16.64■□□□□ 0.25
PCDHB16Q9NRJ7 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHB16Q9NRJ7 AC073210.2-201ENST00000430369 194 ntBASIC16.64■□□□□ 0.25
PCDHB16Q9NRJ7 AC093787.1-201ENST00000450396 207 ntBASIC16.64■□□□□ 0.25
PCDHB16Q9NRJ7 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC16.64■□□□□ 0.25
PCDHB16Q9NRJ7 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC16.64■□□□□ 0.25
PCDHB16Q9NRJ7 AF201337.1-201ENST00000520239 748 ntBASIC16.64■□□□□ 0.25
PCDHB16Q9NRJ7 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHB16Q9NRJ7 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC16.64■□□□□ 0.25
PCDHB16Q9NRJ7 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
PCDHB16Q9NRJ7 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC16.64■□□□□ 0.25
PCDHB16Q9NRJ7 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHB16Q9NRJ7 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHB16Q9NRJ7 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHB16Q9NRJ7 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHB16Q9NRJ7 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHB16Q9NRJ7 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHB16Q9NRJ7 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHB16Q9NRJ7 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
PCDHB16Q9NRJ7 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHB16Q9NRJ7 MKRN4P-201ENST00000444706 1521 ntBASIC16.64■□□□□ 0.25
PCDHB16Q9NRJ7 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHB16Q9NRJ7 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHB16Q9NRJ7 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC16.64■□□□□ 0.25
PCDHB16Q9NRJ7 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHB16Q9NRJ7 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC16.64■□□□□ 0.25
PCDHB16Q9NRJ7 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHB16Q9NRJ7 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHB16Q9NRJ7 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
PCDHB16Q9NRJ7 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC16.63■□□□□ 0.25
PCDHB16Q9NRJ7 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC16.63■□□□□ 0.25
PCDHB16Q9NRJ7 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHB16Q9NRJ7 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHB16Q9NRJ7 PTGES2-AS1-201ENST00000443493 2100 ntBASIC16.63■□□□□ 0.25
PCDHB16Q9NRJ7 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHB16Q9NRJ7 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHB16Q9NRJ7 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC16.63■□□□□ 0.25
PCDHB16Q9NRJ7 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC16.63■□□□□ 0.25
PCDHB16Q9NRJ7 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
PCDHB16Q9NRJ7 SERP1-205ENST00000487153 657 ntTSL 4 BASIC16.63■□□□□ 0.25
PCDHB16Q9NRJ7 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC16.63■□□□□ 0.25
PCDHB16Q9NRJ7 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC16.63■□□□□ 0.25
PCDHB16Q9NRJ7 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHB16Q9NRJ7 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC16.63■□□□□ 0.25
PCDHB16Q9NRJ7 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHB16Q9NRJ7 MAX-217ENST00000557277 728 ntTSL 3 BASIC16.63■□□□□ 0.25
PCDHB16Q9NRJ7 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC16.63■□□□□ 0.25
PCDHB16Q9NRJ7 RAP2CP1-201ENST00000605103 478 ntBASIC16.63■□□□□ 0.25
PCDHB16Q9NRJ7 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHB16Q9NRJ7 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHB16Q9NRJ7 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHB16Q9NRJ7 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
PCDHB16Q9NRJ7 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHB16Q9NRJ7 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
PCDHB16Q9NRJ7 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC16.63■□□□□ 0.25
PCDHB16Q9NRJ7 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHB16Q9NRJ7 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC16.63■□□□□ 0.25
PCDHB16Q9NRJ7 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHB16Q9NRJ7 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHB16Q9NRJ7 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC16.63■□□□□ 0.25
PCDHB16Q9NRJ7 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC16.63■□□□□ 0.25
PCDHB16Q9NRJ7 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
PCDHB16Q9NRJ7 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHB16Q9NRJ7 CRK-204ENST00000574295 1391 ntTSL 5 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms