Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
UPF2Q9HAU5 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC23.54■■□□□ 1.36
UPF2Q9HAU5 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC23.54■■□□□ 1.36
UPF2Q9HAU5 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
UPF2Q9HAU5 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
UPF2Q9HAU5 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC23.54■■□□□ 1.36
UPF2Q9HAU5 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
UPF2Q9HAU5 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
UPF2Q9HAU5 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
UPF2Q9HAU5 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
UPF2Q9HAU5 HSCB-202ENST00000398941 955 ntTSL 2 BASIC23.54■■□□□ 1.36
UPF2Q9HAU5 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC23.54■■□□□ 1.36
UPF2Q9HAU5 DUX4L16-201ENST00000555130 1264 ntBASIC23.54■■□□□ 1.36
UPF2Q9HAU5 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC23.54■■□□□ 1.36
UPF2Q9HAU5 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
UPF2Q9HAU5 WWOX-218ENST00000627394 894 ntTSL 5 BASIC23.54■■□□□ 1.36
UPF2Q9HAU5 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC23.54■■□□□ 1.36
UPF2Q9HAU5 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
UPF2Q9HAU5 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
UPF2Q9HAU5 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC23.54■■□□□ 1.36
UPF2Q9HAU5 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
UPF2Q9HAU5 IRX1P1-201ENST00000438849 1838 ntBASIC23.54■■□□□ 1.36
UPF2Q9HAU5 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
UPF2Q9HAU5 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
UPF2Q9HAU5 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
UPF2Q9HAU5 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
UPF2Q9HAU5 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
UPF2Q9HAU5 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC23.53■■□□□ 1.36
UPF2Q9HAU5 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC23.53■■□□□ 1.36
UPF2Q9HAU5 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
UPF2Q9HAU5 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
UPF2Q9HAU5 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC23.53■■□□□ 1.36
UPF2Q9HAU5 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC23.53■■□□□ 1.36
UPF2Q9HAU5 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
UPF2Q9HAU5 AC016769.1-201ENST00000409132 1010 ntBASIC23.53■■□□□ 1.36
UPF2Q9HAU5 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC23.53■■□□□ 1.36
UPF2Q9HAU5 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC23.53■■□□□ 1.36
UPF2Q9HAU5 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC23.53■■□□□ 1.36
UPF2Q9HAU5 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
UPF2Q9HAU5 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
UPF2Q9HAU5 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
UPF2Q9HAU5 MOK-233ENST00000524214 1539 ntTSL 2 BASIC23.53■■□□□ 1.36
UPF2Q9HAU5 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
UPF2Q9HAU5 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC23.53■■□□□ 1.36
UPF2Q9HAU5 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
UPF2Q9HAU5 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
UPF2Q9HAU5 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
UPF2Q9HAU5 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC23.52■■□□□ 1.36
UPF2Q9HAU5 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC23.52■■□□□ 1.36
UPF2Q9HAU5 AC010980.2-201ENST00000587099 1412 ntBASIC23.52■■□□□ 1.36
UPF2Q9HAU5 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
UPF2Q9HAU5 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC23.52■■□□□ 1.36
UPF2Q9HAU5 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
UPF2Q9HAU5 HACD1-201ENST00000326961 773 ntTSL 2 BASIC23.52■■□□□ 1.36
UPF2Q9HAU5 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC23.52■■□□□ 1.36
UPF2Q9HAU5 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC23.52■■□□□ 1.36
UPF2Q9HAU5 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC23.52■■□□□ 1.36
UPF2Q9HAU5 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
UPF2Q9HAU5 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
UPF2Q9HAU5 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC23.52■■□□□ 1.35
UPF2Q9HAU5 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
UPF2Q9HAU5 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC23.51■■□□□ 1.35
UPF2Q9HAU5 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC23.51■■□□□ 1.35
UPF2Q9HAU5 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
UPF2Q9HAU5 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC23.51■■□□□ 1.35
UPF2Q9HAU5 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC23.51■■□□□ 1.35
UPF2Q9HAU5 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
UPF2Q9HAU5 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
UPF2Q9HAU5 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC23.51■■□□□ 1.35
UPF2Q9HAU5 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
UPF2Q9HAU5 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
UPF2Q9HAU5 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
UPF2Q9HAU5 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
UPF2Q9HAU5 ZNRF2P3-201ENST00000424200 374 ntBASIC23.51■■□□□ 1.35
UPF2Q9HAU5 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
UPF2Q9HAU5 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
UPF2Q9HAU5 OR10C1-204ENST00000622521 1039 ntBASIC23.51■■□□□ 1.35
UPF2Q9HAU5 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC23.51■■□□□ 1.35
UPF2Q9HAU5 AC018470.1-201ENST00000624790 3129 ntBASIC23.51■■□□□ 1.35
UPF2Q9HAU5 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC23.51■■□□□ 1.35
UPF2Q9HAU5 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC23.51■■□□□ 1.35
UPF2Q9HAU5 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
UPF2Q9HAU5 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
UPF2Q9HAU5 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
UPF2Q9HAU5 FP475955.4-201ENST00000623131 1990 ntBASIC23.51■■□□□ 1.35
UPF2Q9HAU5 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
UPF2Q9HAU5 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
UPF2Q9HAU5 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
UPF2Q9HAU5 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC23.5■■□□□ 1.35
UPF2Q9HAU5 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC23.5■■□□□ 1.35
UPF2Q9HAU5 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC23.5■■□□□ 1.35
UPF2Q9HAU5 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
UPF2Q9HAU5 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
UPF2Q9HAU5 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
UPF2Q9HAU5 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
UPF2Q9HAU5 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC23.5■■□□□ 1.35
UPF2Q9HAU5 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC23.5■■□□□ 1.35
UPF2Q9HAU5 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC23.5■■□□□ 1.35
UPF2Q9HAU5 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
UPF2Q9HAU5 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms