Protein–RNA interactions for Protein: Q9H9Z2

LIN28A, Protein lin-28 homolog A, humanhuman

Known RBP Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28AQ9H9Z2 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.43■□□□□ 0.54
LIN28AQ9H9Z2 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.43■□□□□ 0.54
LIN28AQ9H9Z2 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LIN28AQ9H9Z2 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LIN28AQ9H9Z2 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.43■□□□□ 0.54
LIN28AQ9H9Z2 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.43■□□□□ 0.54
LIN28AQ9H9Z2 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.43■□□□□ 0.54
LIN28AQ9H9Z2 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.43■□□□□ 0.54
LIN28AQ9H9Z2 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.43■□□□□ 0.54
LIN28AQ9H9Z2 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.43■□□□□ 0.54
LIN28AQ9H9Z2 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
LIN28AQ9H9Z2 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LIN28AQ9H9Z2 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LIN28AQ9H9Z2 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.43■□□□□ 0.54
LIN28AQ9H9Z2 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LIN28AQ9H9Z2 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LIN28AQ9H9Z2 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LIN28AQ9H9Z2 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LIN28AQ9H9Z2 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LIN28AQ9H9Z2 AL032819.2-201ENST00000624543 2162 ntBASIC18.42■□□□□ 0.54
LIN28AQ9H9Z2 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LIN28AQ9H9Z2 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.42■□□□□ 0.54
LIN28AQ9H9Z2 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.42■□□□□ 0.54
LIN28AQ9H9Z2 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LIN28AQ9H9Z2 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.42■□□□□ 0.54
LIN28AQ9H9Z2 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LIN28AQ9H9Z2 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LIN28AQ9H9Z2 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
LIN28AQ9H9Z2 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LIN28AQ9H9Z2 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LIN28AQ9H9Z2 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LIN28AQ9H9Z2 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.42■□□□□ 0.54
LIN28AQ9H9Z2 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.42■□□□□ 0.54
LIN28AQ9H9Z2 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.42■□□□□ 0.54
LIN28AQ9H9Z2 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
LIN28AQ9H9Z2 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.42■□□□□ 0.54
LIN28AQ9H9Z2 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.42■□□□□ 0.54
LIN28AQ9H9Z2 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
LIN28AQ9H9Z2 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.42■□□□□ 0.54
LIN28AQ9H9Z2 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
LIN28AQ9H9Z2 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
LIN28AQ9H9Z2 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.42■□□□□ 0.54
LIN28AQ9H9Z2 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
LIN28AQ9H9Z2 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LIN28AQ9H9Z2 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LIN28AQ9H9Z2 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
LIN28AQ9H9Z2 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.42■□□□□ 0.54
LIN28AQ9H9Z2 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.42■□□□□ 0.54
LIN28AQ9H9Z2 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LIN28AQ9H9Z2 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.42■□□□□ 0.54
LIN28AQ9H9Z2 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.42■□□□□ 0.54
LIN28AQ9H9Z2 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LIN28AQ9H9Z2 AL138781.2-201ENST00000617896 1843 ntBASIC18.42■□□□□ 0.54
LIN28AQ9H9Z2 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.42■□□□□ 0.54
LIN28AQ9H9Z2 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.42■□□□□ 0.54
LIN28AQ9H9Z2 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.41■□□□□ 0.54
LIN28AQ9H9Z2 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
LIN28AQ9H9Z2 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.41■□□□□ 0.54
LIN28AQ9H9Z2 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
LIN28AQ9H9Z2 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LIN28AQ9H9Z2 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LIN28AQ9H9Z2 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LIN28AQ9H9Z2 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LIN28AQ9H9Z2 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
LIN28AQ9H9Z2 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.41■□□□□ 0.54
LIN28AQ9H9Z2 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
LIN28AQ9H9Z2 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LIN28AQ9H9Z2 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.41■□□□□ 0.54
LIN28AQ9H9Z2 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LIN28AQ9H9Z2 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.41■□□□□ 0.54
LIN28AQ9H9Z2 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.41■□□□□ 0.54
LIN28AQ9H9Z2 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.41■□□□□ 0.54
LIN28AQ9H9Z2 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LIN28AQ9H9Z2 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.41■□□□□ 0.54
LIN28AQ9H9Z2 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.41■□□□□ 0.54
LIN28AQ9H9Z2 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.41■□□□□ 0.54
LIN28AQ9H9Z2 AC012313.1-201ENST00000593393 3059 ntBASIC18.41■□□□□ 0.54
LIN28AQ9H9Z2 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LIN28AQ9H9Z2 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LIN28AQ9H9Z2 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LIN28AQ9H9Z2 Z82202.1-201ENST00000623446 1880 ntBASIC18.41■□□□□ 0.54
LIN28AQ9H9Z2 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
LIN28AQ9H9Z2 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
LIN28AQ9H9Z2 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LIN28AQ9H9Z2 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.4■□□□□ 0.54
LIN28AQ9H9Z2 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LIN28AQ9H9Z2 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
LIN28AQ9H9Z2 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
LIN28AQ9H9Z2 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.4■□□□□ 0.54
LIN28AQ9H9Z2 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.4■□□□□ 0.54
LIN28AQ9H9Z2 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LIN28AQ9H9Z2 KRASP1-201ENST00000407852 552 ntBASIC18.4■□□□□ 0.54
LIN28AQ9H9Z2 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.4■□□□□ 0.54
LIN28AQ9H9Z2 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.4■□□□□ 0.54
LIN28AQ9H9Z2 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.4■□□□□ 0.54
LIN28AQ9H9Z2 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
LIN28AQ9H9Z2 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
LIN28AQ9H9Z2 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.4■□□□□ 0.54
LIN28AQ9H9Z2 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LIN28AQ9H9Z2 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms