Protein–RNA interactions for Protein: Q9H3M0

KCNF1, Potassium voltage-gated channel subfamily F member 1, humanhuman

Predictions only

Length 494 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNF1Q9H3M0 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
KCNF1Q9H3M0 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
KCNF1Q9H3M0 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
KCNF1Q9H3M0 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC20.93■□□□□ 0.94
KCNF1Q9H3M0 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
KCNF1Q9H3M0 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
KCNF1Q9H3M0 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC20.93■□□□□ 0.94
KCNF1Q9H3M0 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.93■□□□□ 0.94
KCNF1Q9H3M0 KRT18P61-201ENST00000585825 1298 ntBASIC20.93■□□□□ 0.94
KCNF1Q9H3M0 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
KCNF1Q9H3M0 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC20.93■□□□□ 0.94
KCNF1Q9H3M0 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
KCNF1Q9H3M0 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
KCNF1Q9H3M0 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
KCNF1Q9H3M0 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC20.93■□□□□ 0.94
KCNF1Q9H3M0 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC20.93■□□□□ 0.94
KCNF1Q9H3M0 AL162741.1-201ENST00000565563 1558 ntBASIC20.93■□□□□ 0.94
KCNF1Q9H3M0 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC20.93■□□□□ 0.94
KCNF1Q9H3M0 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
KCNF1Q9H3M0 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KCNF1Q9H3M0 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
KCNF1Q9H3M0 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KCNF1Q9H3M0 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
KCNF1Q9H3M0 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
KCNF1Q9H3M0 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.92■□□□□ 0.94
KCNF1Q9H3M0 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
KCNF1Q9H3M0 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
KCNF1Q9H3M0 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KCNF1Q9H3M0 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KCNF1Q9H3M0 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
KCNF1Q9H3M0 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
KCNF1Q9H3M0 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
KCNF1Q9H3M0 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
KCNF1Q9H3M0 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
KCNF1Q9H3M0 TERF1P5-201ENST00000477545 1207 ntBASIC20.92■□□□□ 0.94
KCNF1Q9H3M0 SUDS3P1-201ENST00000505831 966 ntBASIC20.92■□□□□ 0.94
KCNF1Q9H3M0 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.92■□□□□ 0.94
KCNF1Q9H3M0 MYCNOS-205ENST00000641950 531 ntBASIC20.92■□□□□ 0.94
KCNF1Q9H3M0 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.92■□□□□ 0.94
KCNF1Q9H3M0 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KCNF1Q9H3M0 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
KCNF1Q9H3M0 FEM1AP3-201ENST00000403722 1741 ntBASIC20.92■□□□□ 0.94
KCNF1Q9H3M0 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
KCNF1Q9H3M0 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC20.92■□□□□ 0.94
KCNF1Q9H3M0 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
KCNF1Q9H3M0 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KCNF1Q9H3M0 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
KCNF1Q9H3M0 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
KCNF1Q9H3M0 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
KCNF1Q9H3M0 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
KCNF1Q9H3M0 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
KCNF1Q9H3M0 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
KCNF1Q9H3M0 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
KCNF1Q9H3M0 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
KCNF1Q9H3M0 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
KCNF1Q9H3M0 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC20.91■□□□□ 0.94
KCNF1Q9H3M0 TFP1-202ENST00000475455 1573 ntBASIC20.91■□□□□ 0.94
KCNF1Q9H3M0 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
KCNF1Q9H3M0 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
KCNF1Q9H3M0 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.91■□□□□ 0.94
KCNF1Q9H3M0 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.91■□□□□ 0.94
KCNF1Q9H3M0 AC110285.6-201ENST00000617652 491 ntBASIC20.91■□□□□ 0.94
KCNF1Q9H3M0 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
KCNF1Q9H3M0 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
KCNF1Q9H3M0 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
KCNF1Q9H3M0 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC20.9■□□□□ 0.94
KCNF1Q9H3M0 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
KCNF1Q9H3M0 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
KCNF1Q9H3M0 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KCNF1Q9H3M0 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.9■□□□□ 0.94
KCNF1Q9H3M0 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.9■□□□□ 0.94
KCNF1Q9H3M0 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.9■□□□□ 0.94
KCNF1Q9H3M0 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KCNF1Q9H3M0 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.9■□□□□ 0.94
KCNF1Q9H3M0 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC20.9■□□□□ 0.94
KCNF1Q9H3M0 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KCNF1Q9H3M0 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC20.9■□□□□ 0.94
KCNF1Q9H3M0 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KCNF1Q9H3M0 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC20.9■□□□□ 0.94
KCNF1Q9H3M0 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
KCNF1Q9H3M0 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
KCNF1Q9H3M0 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
KCNF1Q9H3M0 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KCNF1Q9H3M0 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
KCNF1Q9H3M0 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC20.9■□□□□ 0.94
KCNF1Q9H3M0 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC20.89■□□□□ 0.94
KCNF1Q9H3M0 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC20.89■□□□□ 0.94
KCNF1Q9H3M0 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
KCNF1Q9H3M0 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.94
KCNF1Q9H3M0 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.94
KCNF1Q9H3M0 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
KCNF1Q9H3M0 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.94
KCNF1Q9H3M0 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
KCNF1Q9H3M0 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.89■□□□□ 0.93
KCNF1Q9H3M0 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
KCNF1Q9H3M0 AL162412.1-201ENST00000567129 965 ntBASIC20.89■□□□□ 0.93
KCNF1Q9H3M0 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
KCNF1Q9H3M0 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC20.89■□□□□ 0.93
KCNF1Q9H3M0 AC080080.1-201ENST00000625121 2420 ntBASIC20.89■□□□□ 0.93
KCNF1Q9H3M0 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms