Protein–RNA interactions for Protein: Q9BV44

THUMPD3, THUMP domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3Q9BV44 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
THUMPD3Q9BV44 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
THUMPD3Q9BV44 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
THUMPD3Q9BV44 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.34■□□□□ 0.53
THUMPD3Q9BV44 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.34■□□□□ 0.53
THUMPD3Q9BV44 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.34■□□□□ 0.53
THUMPD3Q9BV44 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.34■□□□□ 0.53
THUMPD3Q9BV44 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
THUMPD3Q9BV44 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
THUMPD3Q9BV44 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
THUMPD3Q9BV44 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
THUMPD3Q9BV44 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
THUMPD3Q9BV44 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
THUMPD3Q9BV44 AC104581.1-202ENST00000635932 2618 ntBASIC18.34■□□□□ 0.53
THUMPD3Q9BV44 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
THUMPD3Q9BV44 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
THUMPD3Q9BV44 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.33■□□□□ 0.53
THUMPD3Q9BV44 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.33■□□□□ 0.53
THUMPD3Q9BV44 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
THUMPD3Q9BV44 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
THUMPD3Q9BV44 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.33■□□□□ 0.53
THUMPD3Q9BV44 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.53
THUMPD3Q9BV44 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
THUMPD3Q9BV44 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
THUMPD3Q9BV44 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
THUMPD3Q9BV44 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
THUMPD3Q9BV44 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
THUMPD3Q9BV44 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.33■□□□□ 0.52
THUMPD3Q9BV44 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.33■□□□□ 0.52
THUMPD3Q9BV44 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
THUMPD3Q9BV44 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.33■□□□□ 0.52
THUMPD3Q9BV44 AL109923.1-201ENST00000618799 583 ntBASIC18.33■□□□□ 0.52
THUMPD3Q9BV44 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
THUMPD3Q9BV44 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
THUMPD3Q9BV44 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
THUMPD3Q9BV44 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
THUMPD3Q9BV44 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.32■□□□□ 0.52
THUMPD3Q9BV44 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.32■□□□□ 0.52
THUMPD3Q9BV44 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
THUMPD3Q9BV44 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
THUMPD3Q9BV44 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
THUMPD3Q9BV44 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
THUMPD3Q9BV44 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
THUMPD3Q9BV44 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
THUMPD3Q9BV44 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
THUMPD3Q9BV44 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
THUMPD3Q9BV44 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
THUMPD3Q9BV44 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
THUMPD3Q9BV44 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.32■□□□□ 0.52
THUMPD3Q9BV44 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
THUMPD3Q9BV44 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.32■□□□□ 0.52
THUMPD3Q9BV44 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.32■□□□□ 0.52
THUMPD3Q9BV44 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
THUMPD3Q9BV44 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
THUMPD3Q9BV44 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
THUMPD3Q9BV44 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
THUMPD3Q9BV44 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
THUMPD3Q9BV44 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.32■□□□□ 0.52
THUMPD3Q9BV44 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
THUMPD3Q9BV44 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
THUMPD3Q9BV44 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.32■□□□□ 0.52
THUMPD3Q9BV44 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.32■□□□□ 0.52
THUMPD3Q9BV44 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
THUMPD3Q9BV44 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
THUMPD3Q9BV44 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
THUMPD3Q9BV44 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
THUMPD3Q9BV44 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
THUMPD3Q9BV44 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.31■□□□□ 0.52
THUMPD3Q9BV44 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.31■□□□□ 0.52
THUMPD3Q9BV44 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
THUMPD3Q9BV44 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.31■□□□□ 0.52
THUMPD3Q9BV44 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
THUMPD3Q9BV44 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
THUMPD3Q9BV44 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
THUMPD3Q9BV44 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
THUMPD3Q9BV44 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
THUMPD3Q9BV44 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
THUMPD3Q9BV44 AL390719.1-204ENST00000412397 1219 ntBASIC18.31■□□□□ 0.52
THUMPD3Q9BV44 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.31■□□□□ 0.52
THUMPD3Q9BV44 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
THUMPD3Q9BV44 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
THUMPD3Q9BV44 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
THUMPD3Q9BV44 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
THUMPD3Q9BV44 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.31■□□□□ 0.52
THUMPD3Q9BV44 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.31■□□□□ 0.52
THUMPD3Q9BV44 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.31■□□□□ 0.52
THUMPD3Q9BV44 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
THUMPD3Q9BV44 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
THUMPD3Q9BV44 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
THUMPD3Q9BV44 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
THUMPD3Q9BV44 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
THUMPD3Q9BV44 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
THUMPD3Q9BV44 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
THUMPD3Q9BV44 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
THUMPD3Q9BV44 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
THUMPD3Q9BV44 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
THUMPD3Q9BV44 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.31■□□□□ 0.52
THUMPD3Q9BV44 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
THUMPD3Q9BV44 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
THUMPD3Q9BV44 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms