Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHRDL1Q9BU40 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHRDL1Q9BU40 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC15.24■□□□□ 0.03
CHRDL1Q9BU40 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC15.24■□□□□ 0.03
CHRDL1Q9BU40 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHRDL1Q9BU40 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHRDL1Q9BU40 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
CHRDL1Q9BU40 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC15.23■□□□□ 0.03
CHRDL1Q9BU40 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC15.23■□□□□ 0.03
CHRDL1Q9BU40 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHRDL1Q9BU40 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC15.23■□□□□ 0.03
CHRDL1Q9BU40 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CHRDL1Q9BU40 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHRDL1Q9BU40 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHRDL1Q9BU40 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CHRDL1Q9BU40 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC15.23■□□□□ 0.03
CHRDL1Q9BU40 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CHRDL1Q9BU40 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CHRDL1Q9BU40 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CHRDL1Q9BU40 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC15.23■□□□□ 0.03
CHRDL1Q9BU40 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC15.23■□□□□ 0.03
CHRDL1Q9BU40 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC15.23■□□□□ 0.03
CHRDL1Q9BU40 RPS2P52-201ENST00000469610 820 ntBASIC15.23■□□□□ 0.03
CHRDL1Q9BU40 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC15.23■□□□□ 0.03
CHRDL1Q9BU40 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC15.23■□□□□ 0.03
CHRDL1Q9BU40 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC15.23■□□□□ 0.03
CHRDL1Q9BU40 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CHRDL1Q9BU40 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
CHRDL1Q9BU40 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHRDL1Q9BU40 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CHRDL1Q9BU40 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CHRDL1Q9BU40 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC15.23■□□□□ 0.03
CHRDL1Q9BU40 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHRDL1Q9BU40 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CHRDL1Q9BU40 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHRDL1Q9BU40 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHRDL1Q9BU40 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CHRDL1Q9BU40 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHRDL1Q9BU40 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHRDL1Q9BU40 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHRDL1Q9BU40 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
CHRDL1Q9BU40 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CHRDL1Q9BU40 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CHRDL1Q9BU40 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHRDL1Q9BU40 AC093503.3-201ENST00000624917 2352 ntBASIC15.22■□□□□ 0.03
CHRDL1Q9BU40 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHRDL1Q9BU40 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHRDL1Q9BU40 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHRDL1Q9BU40 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHRDL1Q9BU40 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CHRDL1Q9BU40 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC15.22■□□□□ 0.03
CHRDL1Q9BU40 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHRDL1Q9BU40 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHRDL1Q9BU40 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CHRDL1Q9BU40 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC15.22■□□□□ 0.03
CHRDL1Q9BU40 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC15.22■□□□□ 0.03
CHRDL1Q9BU40 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC15.22■□□□□ 0.03
CHRDL1Q9BU40 OR2A1-AS1-207ENST00000486094 819 ntBASIC15.22■□□□□ 0.03
CHRDL1Q9BU40 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC15.22■□□□□ 0.03
CHRDL1Q9BU40 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC15.22■□□□□ 0.03
CHRDL1Q9BU40 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC15.22■□□□□ 0.03
CHRDL1Q9BU40 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC15.22■□□□□ 0.03
CHRDL1Q9BU40 RGMA-211ENST00000557420 989 ntTSL 3 BASIC15.22■□□□□ 0.03
CHRDL1Q9BU40 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC15.22■□□□□ 0.03
CHRDL1Q9BU40 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CHRDL1Q9BU40 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC15.22■□□□□ 0.03
CHRDL1Q9BU40 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHRDL1Q9BU40 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC15.22■□□□□ 0.03
CHRDL1Q9BU40 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHRDL1Q9BU40 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CHRDL1Q9BU40 TFP1-202ENST00000475455 1573 ntBASIC15.22■□□□□ 0.03
CHRDL1Q9BU40 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC15.22■□□□□ 0.03
CHRDL1Q9BU40 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHRDL1Q9BU40 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CHRDL1Q9BU40 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHRDL1Q9BU40 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC15.22■□□□□ 0.03
CHRDL1Q9BU40 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHRDL1Q9BU40 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC15.22■□□□□ 0.03
CHRDL1Q9BU40 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHRDL1Q9BU40 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
CHRDL1Q9BU40 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHRDL1Q9BU40 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHRDL1Q9BU40 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHRDL1Q9BU40 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHRDL1Q9BU40 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CHRDL1Q9BU40 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHRDL1Q9BU40 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHRDL1Q9BU40 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHRDL1Q9BU40 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHRDL1Q9BU40 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHRDL1Q9BU40 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC15.21■□□□□ 0.03
CHRDL1Q9BU40 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CHRDL1Q9BU40 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CHRDL1Q9BU40 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHRDL1Q9BU40 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC15.21■□□□□ 0.03
CHRDL1Q9BU40 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC15.21■□□□□ 0.03
CHRDL1Q9BU40 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC15.21■□□□□ 0.03
CHRDL1Q9BU40 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC15.21■□□□□ 0.03
CHRDL1Q9BU40 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC15.21■□□□□ 0.03
CHRDL1Q9BU40 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms