Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
CCM2Q9BSQ5 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCM2Q9BSQ5 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.89■□□□□ 0.61
CCM2Q9BSQ5 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.89■□□□□ 0.61
CCM2Q9BSQ5 B3GAT3P1-201ENST00000471720 806 ntBASIC18.89■□□□□ 0.61
CCM2Q9BSQ5 AC091390.4-202ENST00000476426 537 ntBASIC18.89■□□□□ 0.61
CCM2Q9BSQ5 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.89■□□□□ 0.61
CCM2Q9BSQ5 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.89■□□□□ 0.61
CCM2Q9BSQ5 AC011298.2-201ENST00000617989 482 ntBASIC18.89■□□□□ 0.61
CCM2Q9BSQ5 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
CCM2Q9BSQ5 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCM2Q9BSQ5 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.89■□□□□ 0.61
CCM2Q9BSQ5 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CCM2Q9BSQ5 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCM2Q9BSQ5 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCM2Q9BSQ5 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.89■□□□□ 0.61
CCM2Q9BSQ5 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.88■□□□□ 0.61
CCM2Q9BSQ5 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCM2Q9BSQ5 AC005332.7-201ENST00000614046 2005 ntBASIC18.88■□□□□ 0.61
CCM2Q9BSQ5 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCM2Q9BSQ5 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCM2Q9BSQ5 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCM2Q9BSQ5 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CCM2Q9BSQ5 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCM2Q9BSQ5 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.88■□□□□ 0.61
CCM2Q9BSQ5 MESTP1-201ENST00000404287 994 ntBASIC18.88■□□□□ 0.61
CCM2Q9BSQ5 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.88■□□□□ 0.61
CCM2Q9BSQ5 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.88■□□□□ 0.61
CCM2Q9BSQ5 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.88■□□□□ 0.61
CCM2Q9BSQ5 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCM2Q9BSQ5 REXO1L10P-201ENST00000615707 1290 ntBASIC18.88■□□□□ 0.61
CCM2Q9BSQ5 REXO1L12P-201ENST00000622156 912 ntBASIC18.88■□□□□ 0.61
CCM2Q9BSQ5 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.88■□□□□ 0.61
CCM2Q9BSQ5 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.88■□□□□ 0.61
CCM2Q9BSQ5 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCM2Q9BSQ5 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.88■□□□□ 0.61
CCM2Q9BSQ5 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCM2Q9BSQ5 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.88■□□□□ 0.61
CCM2Q9BSQ5 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCM2Q9BSQ5 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.88■□□□□ 0.61
CCM2Q9BSQ5 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.88■□□□□ 0.61
CCM2Q9BSQ5 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCM2Q9BSQ5 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCM2Q9BSQ5 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CCM2Q9BSQ5 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCM2Q9BSQ5 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.88■□□□□ 0.61
CCM2Q9BSQ5 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCM2Q9BSQ5 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCM2Q9BSQ5 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCM2Q9BSQ5 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCM2Q9BSQ5 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCM2Q9BSQ5 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCM2Q9BSQ5 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCM2Q9BSQ5 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.87■□□□□ 0.61
CCM2Q9BSQ5 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.87■□□□□ 0.61
CCM2Q9BSQ5 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCM2Q9BSQ5 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.87■□□□□ 0.61
CCM2Q9BSQ5 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.87■□□□□ 0.61
CCM2Q9BSQ5 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.87■□□□□ 0.61
CCM2Q9BSQ5 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.87■□□□□ 0.61
CCM2Q9BSQ5 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.87■□□□□ 0.61
CCM2Q9BSQ5 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCM2Q9BSQ5 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCM2Q9BSQ5 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.86■□□□□ 0.61
CCM2Q9BSQ5 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCM2Q9BSQ5 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCM2Q9BSQ5 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCM2Q9BSQ5 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCM2Q9BSQ5 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCM2Q9BSQ5 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCM2Q9BSQ5 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCM2Q9BSQ5 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.86■□□□□ 0.61
CCM2Q9BSQ5 TSPY21P-201ENST00000433481 731 ntBASIC18.86■□□□□ 0.61
CCM2Q9BSQ5 AC008040.2-201ENST00000461049 708 ntBASIC18.86■□□□□ 0.61
CCM2Q9BSQ5 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
CCM2Q9BSQ5 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.86■□□□□ 0.61
CCM2Q9BSQ5 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.86■□□□□ 0.61
CCM2Q9BSQ5 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCM2Q9BSQ5 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.86■□□□□ 0.61
CCM2Q9BSQ5 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.86■□□□□ 0.61
CCM2Q9BSQ5 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCM2Q9BSQ5 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.86■□□□□ 0.61
CCM2Q9BSQ5 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.86■□□□□ 0.61
CCM2Q9BSQ5 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCM2Q9BSQ5 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCM2Q9BSQ5 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CCM2Q9BSQ5 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.85■□□□□ 0.61
CCM2Q9BSQ5 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCM2Q9BSQ5 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCM2Q9BSQ5 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCM2Q9BSQ5 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
CCM2Q9BSQ5 FAM207BP-201ENST00000447172 505 ntBASIC18.85■□□□□ 0.61
CCM2Q9BSQ5 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.85■□□□□ 0.61
CCM2Q9BSQ5 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.85■□□□□ 0.61
CCM2Q9BSQ5 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CCM2Q9BSQ5 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.85■□□□□ 0.61
CCM2Q9BSQ5 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCM2Q9BSQ5 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
CCM2Q9BSQ5 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCM2Q9BSQ5 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms