Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.71■■□□□ 1.07
ARID3AQ99856 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
ARID3AQ99856 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC21.71■■□□□ 1.07
ARID3AQ99856 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.71■■□□□ 1.07
ARID3AQ99856 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.71■■□□□ 1.07
ARID3AQ99856 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ARID3AQ99856 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ARID3AQ99856 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21.71■■□□□ 1.07
ARID3AQ99856 AC104771.1-201ENST00000603335 964 ntBASIC21.71■■□□□ 1.07
ARID3AQ99856 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
ARID3AQ99856 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC21.71■■□□□ 1.07
ARID3AQ99856 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
ARID3AQ99856 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
ARID3AQ99856 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC21.71■■□□□ 1.07
ARID3AQ99856 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC21.71■■□□□ 1.07
ARID3AQ99856 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ARID3AQ99856 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
ARID3AQ99856 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ARID3AQ99856 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
ARID3AQ99856 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
ARID3AQ99856 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
ARID3AQ99856 DPP3P2-201ENST00000416030 1696 ntBASIC21.7■■□□□ 1.06
ARID3AQ99856 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC21.7■■□□□ 1.06
ARID3AQ99856 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
ARID3AQ99856 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
ARID3AQ99856 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ARID3AQ99856 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
ARID3AQ99856 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ARID3AQ99856 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.7■■□□□ 1.06
ARID3AQ99856 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC21.7■■□□□ 1.06
ARID3AQ99856 AL138781.1-201ENST00000566567 1274 ntBASIC21.7■■□□□ 1.06
ARID3AQ99856 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC21.7■■□□□ 1.06
ARID3AQ99856 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.7■■□□□ 1.06
ARID3AQ99856 AL589743.5-201ENST00000616611 1050 ntBASIC21.7■■□□□ 1.06
ARID3AQ99856 AL109923.1-201ENST00000618799 583 ntBASIC21.7■■□□□ 1.06
ARID3AQ99856 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC21.7■■□□□ 1.06
ARID3AQ99856 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
ARID3AQ99856 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC21.7■■□□□ 1.06
ARID3AQ99856 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ARID3AQ99856 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
ARID3AQ99856 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
ARID3AQ99856 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC21.69■■□□□ 1.06
ARID3AQ99856 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
ARID3AQ99856 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
ARID3AQ99856 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
ARID3AQ99856 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC21.69■■□□□ 1.06
ARID3AQ99856 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
ARID3AQ99856 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
ARID3AQ99856 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
ARID3AQ99856 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC21.69■■□□□ 1.06
ARID3AQ99856 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
ARID3AQ99856 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ARID3AQ99856 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.69■■□□□ 1.06
ARID3AQ99856 LSM12P1-201ENST00000411836 588 ntBASIC21.69■■□□□ 1.06
ARID3AQ99856 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC21.69■■□□□ 1.06
ARID3AQ99856 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ARID3AQ99856 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC21.69■■□□□ 1.06
ARID3AQ99856 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
ARID3AQ99856 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC21.69■■□□□ 1.06
ARID3AQ99856 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
ARID3AQ99856 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
ARID3AQ99856 FER1L4-210ENST00000615531 5998 ntBASIC21.69■■□□□ 1.06
ARID3AQ99856 H19-201ENST00000411754 1788 ntTSL 5 BASIC21.69■■□□□ 1.06
ARID3AQ99856 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC21.69■■□□□ 1.06
ARID3AQ99856 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
ARID3AQ99856 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ARID3AQ99856 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
ARID3AQ99856 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
ARID3AQ99856 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC21.68■■□□□ 1.06
ARID3AQ99856 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
ARID3AQ99856 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
ARID3AQ99856 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ARID3AQ99856 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC21.68■■□□□ 1.06
ARID3AQ99856 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC21.68■■□□□ 1.06
ARID3AQ99856 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
ARID3AQ99856 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
ARID3AQ99856 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ARID3AQ99856 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
ARID3AQ99856 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
ARID3AQ99856 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ARID3AQ99856 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ARID3AQ99856 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
ARID3AQ99856 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
ARID3AQ99856 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC21.68■■□□□ 1.06
ARID3AQ99856 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC21.68■■□□□ 1.06
ARID3AQ99856 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC21.68■■□□□ 1.06
ARID3AQ99856 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
ARID3AQ99856 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC21.68■■□□□ 1.06
ARID3AQ99856 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
ARID3AQ99856 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ARID3AQ99856 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
ARID3AQ99856 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
ARID3AQ99856 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
ARID3AQ99856 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.67■■□□□ 1.06
ARID3AQ99856 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ARID3AQ99856 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC21.67■■□□□ 1.06
ARID3AQ99856 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ARID3AQ99856 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ARID3AQ99856 SLC29A4P1-201ENST00000398760 971 ntBASIC21.67■■□□□ 1.06
ARID3AQ99856 OR2A1-AS1-201ENST00000462305 773 ntBASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms