Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.44■□□□□ 0.38
SNX18Q96RF0 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.44■□□□□ 0.38
SNX18Q96RF0 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNX18Q96RF0 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SNX18Q96RF0 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SNX18Q96RF0 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNX18Q96RF0 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
SNX18Q96RF0 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
SNX18Q96RF0 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
SNX18Q96RF0 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.43■□□□□ 0.38
SNX18Q96RF0 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SNX18Q96RF0 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
SNX18Q96RF0 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
SNX18Q96RF0 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.43■□□□□ 0.38
SNX18Q96RF0 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
SNX18Q96RF0 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
SNX18Q96RF0 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SNX18Q96RF0 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SNX18Q96RF0 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SNX18Q96RF0 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SNX18Q96RF0 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC17.43■□□□□ 0.38
SNX18Q96RF0 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
SNX18Q96RF0 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
SNX18Q96RF0 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
SNX18Q96RF0 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SNX18Q96RF0 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SNX18Q96RF0 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SNX18Q96RF0 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
SNX18Q96RF0 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SNX18Q96RF0 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.43■□□□□ 0.38
SNX18Q96RF0 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNX18Q96RF0 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNX18Q96RF0 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.42■□□□□ 0.38
SNX18Q96RF0 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SNX18Q96RF0 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
SNX18Q96RF0 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SNX18Q96RF0 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNX18Q96RF0 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SNX18Q96RF0 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNX18Q96RF0 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SNX18Q96RF0 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SNX18Q96RF0 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
SNX18Q96RF0 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC17.42■□□□□ 0.38
SNX18Q96RF0 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC17.42■□□□□ 0.38
SNX18Q96RF0 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC17.42■□□□□ 0.38
SNX18Q96RF0 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNX18Q96RF0 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.42■□□□□ 0.38
SNX18Q96RF0 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNX18Q96RF0 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNX18Q96RF0 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SNX18Q96RF0 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNX18Q96RF0 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SNX18Q96RF0 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNX18Q96RF0 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.41■□□□□ 0.38
SNX18Q96RF0 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.41■□□□□ 0.38
SNX18Q96RF0 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNX18Q96RF0 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SNX18Q96RF0 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.41■□□□□ 0.38
SNX18Q96RF0 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNX18Q96RF0 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.41■□□□□ 0.38
SNX18Q96RF0 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SNX18Q96RF0 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC17.41■□□□□ 0.38
SNX18Q96RF0 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC17.41■□□□□ 0.38
SNX18Q96RF0 AC097658.1-201ENST00000475555 843 ntBASIC17.41■□□□□ 0.38
SNX18Q96RF0 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
SNX18Q96RF0 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC17.41■□□□□ 0.38
SNX18Q96RF0 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SNX18Q96RF0 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNX18Q96RF0 HLA-B-256ENST00000639848 1089 ntBASIC17.41■□□□□ 0.38
SNX18Q96RF0 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNX18Q96RF0 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNX18Q96RF0 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.41■□□□□ 0.38
SNX18Q96RF0 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNX18Q96RF0 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.41■□□□□ 0.38
SNX18Q96RF0 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNX18Q96RF0 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNX18Q96RF0 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.41■□□□□ 0.38
SNX18Q96RF0 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
SNX18Q96RF0 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNX18Q96RF0 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNX18Q96RF0 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SNX18Q96RF0 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.4■□□□□ 0.38
SNX18Q96RF0 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.4■□□□□ 0.38
SNX18Q96RF0 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNX18Q96RF0 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
SNX18Q96RF0 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SNX18Q96RF0 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.4■□□□□ 0.38
SNX18Q96RF0 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.4■□□□□ 0.38
SNX18Q96RF0 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.4■□□□□ 0.38
SNX18Q96RF0 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNX18Q96RF0 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNX18Q96RF0 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SNX18Q96RF0 AC018470.1-201ENST00000624790 3129 ntBASIC17.4■□□□□ 0.38
SNX18Q96RF0 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNX18Q96RF0 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNX18Q96RF0 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNX18Q96RF0 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNX18Q96RF0 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.4■□□□□ 0.38
SNX18Q96RF0 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
SNX18Q96RF0 POU5F1P3-201ENST00000428824 1078 ntBASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms