Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
RAB3IPQ96QF0 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAB3IPQ96QF0 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAB3IPQ96QF0 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAB3IPQ96QF0 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAB3IPQ96QF0 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAB3IPQ96QF0 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAB3IPQ96QF0 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
RAB3IPQ96QF0 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RAB3IPQ96QF0 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAB3IPQ96QF0 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.72■□□□□ 0.59
RAB3IPQ96QF0 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAB3IPQ96QF0 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
RAB3IPQ96QF0 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAB3IPQ96QF0 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC18.71■□□□□ 0.59
RAB3IPQ96QF0 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
RAB3IPQ96QF0 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.71■□□□□ 0.59
RAB3IPQ96QF0 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.71■□□□□ 0.59
RAB3IPQ96QF0 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.71■□□□□ 0.59
RAB3IPQ96QF0 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB3IPQ96QF0 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB3IPQ96QF0 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.71■□□□□ 0.59
RAB3IPQ96QF0 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.71■□□□□ 0.59
RAB3IPQ96QF0 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RAB3IPQ96QF0 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB3IPQ96QF0 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RAB3IPQ96QF0 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.71■□□□□ 0.59
RAB3IPQ96QF0 MIR4466-201ENST00000606121 54 ntBASIC18.71■□□□□ 0.59
RAB3IPQ96QF0 IRX1P1-201ENST00000438849 1838 ntBASIC18.71■□□□□ 0.59
RAB3IPQ96QF0 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.71■□□□□ 0.59
RAB3IPQ96QF0 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.71■□□□□ 0.59
RAB3IPQ96QF0 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB3IPQ96QF0 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB3IPQ96QF0 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB3IPQ96QF0 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
RAB3IPQ96QF0 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB3IPQ96QF0 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB3IPQ96QF0 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RAB3IPQ96QF0 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB3IPQ96QF0 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RAB3IPQ96QF0 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAB3IPQ96QF0 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
RAB3IPQ96QF0 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
RAB3IPQ96QF0 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAB3IPQ96QF0 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.7■□□□□ 0.58
RAB3IPQ96QF0 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RAB3IPQ96QF0 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.7■□□□□ 0.58
RAB3IPQ96QF0 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.7■□□□□ 0.58
RAB3IPQ96QF0 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RAB3IPQ96QF0 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
RAB3IPQ96QF0 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.7■□□□□ 0.58
RAB3IPQ96QF0 AL162741.1-201ENST00000565563 1558 ntBASIC18.7■□□□□ 0.58
RAB3IPQ96QF0 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.7■□□□□ 0.58
RAB3IPQ96QF0 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.7■□□□□ 0.58
RAB3IPQ96QF0 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.7■□□□□ 0.58
RAB3IPQ96QF0 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.7■□□□□ 0.58
RAB3IPQ96QF0 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
RAB3IPQ96QF0 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
RAB3IPQ96QF0 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
RAB3IPQ96QF0 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.7■□□□□ 0.58
RAB3IPQ96QF0 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.7■□□□□ 0.58
RAB3IPQ96QF0 LINC00896-202ENST00000609602 2128 ntBASIC18.7■□□□□ 0.58
RAB3IPQ96QF0 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
RAB3IPQ96QF0 AC073592.3-201ENST00000625118 1834 ntBASIC18.7■□□□□ 0.58
RAB3IPQ96QF0 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB3IPQ96QF0 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
RAB3IPQ96QF0 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RAB3IPQ96QF0 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB3IPQ96QF0 GNAS-203ENST00000306120 1878 ntBASIC18.69■□□□□ 0.58
RAB3IPQ96QF0 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB3IPQ96QF0 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB3IPQ96QF0 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB3IPQ96QF0 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB3IPQ96QF0 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB3IPQ96QF0 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB3IPQ96QF0 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.69■□□□□ 0.58
RAB3IPQ96QF0 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB3IPQ96QF0 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB3IPQ96QF0 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB3IPQ96QF0 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.69■□□□□ 0.58
RAB3IPQ96QF0 IGHV3-19-201ENST00000521488 291 ntBASIC18.69■□□□□ 0.58
RAB3IPQ96QF0 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB3IPQ96QF0 SF1-220ENST00000626028 704 ntTSL 2 BASIC18.69■□□□□ 0.58
RAB3IPQ96QF0 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB3IPQ96QF0 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RAB3IPQ96QF0 PTBP1P-201ENST00000554374 1601 ntBASIC18.69■□□□□ 0.58
RAB3IPQ96QF0 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB3IPQ96QF0 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB3IPQ96QF0 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB3IPQ96QF0 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB3IPQ96QF0 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB3IPQ96QF0 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.69■□□□□ 0.58
RAB3IPQ96QF0 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.69■□□□□ 0.58
RAB3IPQ96QF0 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.68■□□□□ 0.58
RAB3IPQ96QF0 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB3IPQ96QF0 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
RAB3IPQ96QF0 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB3IPQ96QF0 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB3IPQ96QF0 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
RAB3IPQ96QF0 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms