Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.96■□□□□ 0.95
ALPK3Q96L96 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ALPK3Q96L96 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ALPK3Q96L96 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ALPK3Q96L96 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.96■□□□□ 0.95
ALPK3Q96L96 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ALPK3Q96L96 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
ALPK3Q96L96 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC20.96■□□□□ 0.95
ALPK3Q96L96 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC20.96■□□□□ 0.95
ALPK3Q96L96 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ALPK3Q96L96 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC20.96■□□□□ 0.95
ALPK3Q96L96 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ALPK3Q96L96 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ALPK3Q96L96 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC20.95■□□□□ 0.94
ALPK3Q96L96 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC20.95■□□□□ 0.94
ALPK3Q96L96 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ALPK3Q96L96 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
ALPK3Q96L96 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ALPK3Q96L96 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ALPK3Q96L96 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ALPK3Q96L96 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ALPK3Q96L96 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ALPK3Q96L96 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ALPK3Q96L96 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.95■□□□□ 0.94
ALPK3Q96L96 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
ALPK3Q96L96 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
ALPK3Q96L96 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ALPK3Q96L96 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.94■□□□□ 0.94
ALPK3Q96L96 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ALPK3Q96L96 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC20.94■□□□□ 0.94
ALPK3Q96L96 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.94■□□□□ 0.94
ALPK3Q96L96 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.94■□□□□ 0.94
ALPK3Q96L96 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ALPK3Q96L96 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ALPK3Q96L96 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC20.94■□□□□ 0.94
ALPK3Q96L96 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC20.94■□□□□ 0.94
ALPK3Q96L96 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
ALPK3Q96L96 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC20.94■□□□□ 0.94
ALPK3Q96L96 AL139424.1-201ENST00000607572 797 ntBASIC20.94■□□□□ 0.94
ALPK3Q96L96 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ALPK3Q96L96 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ALPK3Q96L96 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC20.94■□□□□ 0.94
ALPK3Q96L96 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
ALPK3Q96L96 PMS2P2-201ENST00000425039 1128 ntBASIC20.94■□□□□ 0.94
ALPK3Q96L96 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC20.94■□□□□ 0.94
ALPK3Q96L96 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC20.94■□□□□ 0.94
ALPK3Q96L96 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
ALPK3Q96L96 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ALPK3Q96L96 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
ALPK3Q96L96 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ALPK3Q96L96 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.93■□□□□ 0.94
ALPK3Q96L96 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ALPK3Q96L96 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ALPK3Q96L96 TLE1-202ENST00000376484 666 ntTSL 3 BASIC20.93■□□□□ 0.94
ALPK3Q96L96 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
ALPK3Q96L96 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ALPK3Q96L96 BX842568.4-201ENST00000421222 227 ntBASIC20.93■□□□□ 0.94
ALPK3Q96L96 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
ALPK3Q96L96 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ALPK3Q96L96 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ALPK3Q96L96 RPL18-209ENST00000550645 463 ntTSL 5 BASIC20.93■□□□□ 0.94
ALPK3Q96L96 RPL18-214ENST00000552588 559 ntTSL 3 BASIC20.93■□□□□ 0.94
ALPK3Q96L96 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.93■□□□□ 0.94
ALPK3Q96L96 EP400NL-214ENST00000641289 2402 ntBASIC20.93■□□□□ 0.94
ALPK3Q96L96 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ALPK3Q96L96 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ALPK3Q96L96 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ALPK3Q96L96 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC20.92■□□□□ 0.94
ALPK3Q96L96 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
ALPK3Q96L96 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ALPK3Q96L96 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ALPK3Q96L96 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ALPK3Q96L96 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC20.92■□□□□ 0.94
ALPK3Q96L96 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC20.92■□□□□ 0.94
ALPK3Q96L96 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ALPK3Q96L96 AL355385.1-201ENST00000606123 409 ntBASIC20.92■□□□□ 0.94
ALPK3Q96L96 AC148477.8-201ENST00000624298 468 ntBASIC20.92■□□□□ 0.94
ALPK3Q96L96 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ALPK3Q96L96 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.92■□□□□ 0.94
ALPK3Q96L96 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ALPK3Q96L96 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
ALPK3Q96L96 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
ALPK3Q96L96 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
ALPK3Q96L96 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
ALPK3Q96L96 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC20.92■□□□□ 0.94
ALPK3Q96L96 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ALPK3Q96L96 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
ALPK3Q96L96 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
ALPK3Q96L96 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC20.92■□□□□ 0.94
ALPK3Q96L96 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC20.92■□□□□ 0.94
ALPK3Q96L96 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC20.92■□□□□ 0.94
ALPK3Q96L96 PGAM5P1-201ENST00000518923 814 ntBASIC20.92■□□□□ 0.94
ALPK3Q96L96 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ALPK3Q96L96 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC20.92■□□□□ 0.94
ALPK3Q96L96 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ALPK3Q96L96 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ALPK3Q96L96 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
ALPK3Q96L96 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ALPK3Q96L96 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ALPK3Q96L96 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms