Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.72■□□□□ 0.91
SNX27Q96L92 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SNX27Q96L92 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SNX27Q96L92 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SNX27Q96L92 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SNX27Q96L92 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC20.72■□□□□ 0.91
SNX27Q96L92 TERF1P1-201ENST00000311003 1181 ntBASIC20.72■□□□□ 0.91
SNX27Q96L92 UPK3BP1-201ENST00000428678 509 ntBASIC20.72■□□□□ 0.91
SNX27Q96L92 AC128688.1-201ENST00000487626 519 ntBASIC20.72■□□□□ 0.91
SNX27Q96L92 NMU-205ENST00000511469 756 ntTSL 3 BASIC20.72■□□□□ 0.91
SNX27Q96L92 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC20.72■□□□□ 0.91
SNX27Q96L92 AL023803.3-201ENST00000615559 522 ntBASIC20.72■□□□□ 0.91
SNX27Q96L92 AC116562.4-202ENST00000641738 218 ntBASIC20.72■□□□□ 0.91
SNX27Q96L92 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.72■□□□□ 0.91
SNX27Q96L92 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SNX27Q96L92 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
SNX27Q96L92 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.72■□□□□ 0.91
SNX27Q96L92 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SNX27Q96L92 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
SNX27Q96L92 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.72■□□□□ 0.91
SNX27Q96L92 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
SNX27Q96L92 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SNX27Q96L92 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.71■□□□□ 0.91
SNX27Q96L92 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.71■□□□□ 0.91
SNX27Q96L92 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.71■□□□□ 0.91
SNX27Q96L92 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
SNX27Q96L92 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SNX27Q96L92 TSPY21P-201ENST00000433481 731 ntBASIC20.71■□□□□ 0.91
SNX27Q96L92 CCR12P-201ENST00000446203 998 ntBASIC20.71■□□□□ 0.91
SNX27Q96L92 CA15P1-201ENST00000481698 905 ntBASIC20.71■□□□□ 0.91
SNX27Q96L92 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC20.71■□□□□ 0.91
SNX27Q96L92 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
SNX27Q96L92 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC20.71■□□□□ 0.91
SNX27Q96L92 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SNX27Q96L92 NTF6B-201ENST00000591913 560 ntBASIC20.71■□□□□ 0.91
SNX27Q96L92 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC20.71■□□□□ 0.91
SNX27Q96L92 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.71■□□□□ 0.91
SNX27Q96L92 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
SNX27Q96L92 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SNX27Q96L92 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.71■□□□□ 0.91
SNX27Q96L92 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.71■□□□□ 0.91
SNX27Q96L92 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SNX27Q96L92 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SNX27Q96L92 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SNX27Q96L92 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.7■□□□□ 0.91
SNX27Q96L92 AC092338.2-201ENST00000568827 1415 ntBASIC20.7■□□□□ 0.9
SNX27Q96L92 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SNX27Q96L92 AL158211.5-201ENST00000623583 2518 ntBASIC20.7■□□□□ 0.9
SNX27Q96L92 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
SNX27Q96L92 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.7■□□□□ 0.9
SNX27Q96L92 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.7■□□□□ 0.9
SNX27Q96L92 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SNX27Q96L92 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
SNX27Q96L92 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
SNX27Q96L92 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SNX27Q96L92 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SNX27Q96L92 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
SNX27Q96L92 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
SNX27Q96L92 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC20.7■□□□□ 0.9
SNX27Q96L92 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
SNX27Q96L92 Z82202.1-201ENST00000623446 1880 ntBASIC20.7■□□□□ 0.9
SNX27Q96L92 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SNX27Q96L92 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SNX27Q96L92 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
SNX27Q96L92 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
SNX27Q96L92 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SNX27Q96L92 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SNX27Q96L92 AC073508.3-201ENST00000619697 1419 ntBASIC20.7■□□□□ 0.9
SNX27Q96L92 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.69■□□□□ 0.9
SNX27Q96L92 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SNX27Q96L92 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SNX27Q96L92 AFG3L1P-217ENST00000557444 2447 ntBASIC20.69■□□□□ 0.9
SNX27Q96L92 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SNX27Q96L92 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
SNX27Q96L92 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SNX27Q96L92 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
SNX27Q96L92 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SNX27Q96L92 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
SNX27Q96L92 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC20.69■□□□□ 0.9
SNX27Q96L92 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SNX27Q96L92 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
SNX27Q96L92 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC20.69■□□□□ 0.9
SNX27Q96L92 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SNX27Q96L92 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SNX27Q96L92 KRT18P48-201ENST00000434763 852 ntBASIC20.69■□□□□ 0.9
SNX27Q96L92 AC007663.1-201ENST00000438948 1240 ntBASIC20.69■□□□□ 0.9
SNX27Q96L92 KRT18P57-201ENST00000443599 1254 ntBASIC20.69■□□□□ 0.9
SNX27Q96L92 AC010203.1-204ENST00000548782 407 ntBASIC20.69■□□□□ 0.9
SNX27Q96L92 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC20.69■□□□□ 0.9
SNX27Q96L92 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SNX27Q96L92 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.69■□□□□ 0.9
SNX27Q96L92 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.69■□□□□ 0.9
SNX27Q96L92 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SNX27Q96L92 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SNX27Q96L92 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
SNX27Q96L92 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SNX27Q96L92 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SNX27Q96L92 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SNX27Q96L92 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SNX27Q96L92 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms