Protein–RNA interactions for Protein: Q96DD0

LRRC39, Leucine-rich repeat-containing protein 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39Q96DD0 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LRRC39Q96DD0 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LRRC39Q96DD0 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LRRC39Q96DD0 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
LRRC39Q96DD0 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
LRRC39Q96DD0 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LRRC39Q96DD0 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LRRC39Q96DD0 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.38■□□□□ 0.69
LRRC39Q96DD0 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
LRRC39Q96DD0 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
LRRC39Q96DD0 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.38■□□□□ 0.69
LRRC39Q96DD0 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.38■□□□□ 0.69
LRRC39Q96DD0 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.38■□□□□ 0.69
LRRC39Q96DD0 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.38■□□□□ 0.69
LRRC39Q96DD0 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRRC39Q96DD0 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.37■□□□□ 0.69
LRRC39Q96DD0 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRRC39Q96DD0 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.37■□□□□ 0.69
LRRC39Q96DD0 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.37■□□□□ 0.69
LRRC39Q96DD0 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRRC39Q96DD0 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRRC39Q96DD0 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRRC39Q96DD0 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRRC39Q96DD0 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.37■□□□□ 0.69
LRRC39Q96DD0 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRRC39Q96DD0 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
LRRC39Q96DD0 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRRC39Q96DD0 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRRC39Q96DD0 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRRC39Q96DD0 TSPY21P-201ENST00000433481 731 ntBASIC19.37■□□□□ 0.69
LRRC39Q96DD0 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.37■□□□□ 0.69
LRRC39Q96DD0 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.37■□□□□ 0.69
LRRC39Q96DD0 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.37■□□□□ 0.69
LRRC39Q96DD0 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.37■□□□□ 0.69
LRRC39Q96DD0 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRRC39Q96DD0 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.37■□□□□ 0.69
LRRC39Q96DD0 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
LRRC39Q96DD0 AC133041.1-202ENST00000642053 222 ntBASIC19.37■□□□□ 0.69
LRRC39Q96DD0 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRRC39Q96DD0 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRRC39Q96DD0 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.37■□□□□ 0.69
LRRC39Q96DD0 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRRC39Q96DD0 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
LRRC39Q96DD0 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRRC39Q96DD0 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRRC39Q96DD0 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRRC39Q96DD0 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRRC39Q96DD0 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LRRC39Q96DD0 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRRC39Q96DD0 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.36■□□□□ 0.69
LRRC39Q96DD0 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRRC39Q96DD0 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRRC39Q96DD0 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
LRRC39Q96DD0 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
LRRC39Q96DD0 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRRC39Q96DD0 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LRRC39Q96DD0 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRRC39Q96DD0 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRRC39Q96DD0 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LRRC39Q96DD0 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LRRC39Q96DD0 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRRC39Q96DD0 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRRC39Q96DD0 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.36■□□□□ 0.69
LRRC39Q96DD0 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.36■□□□□ 0.69
LRRC39Q96DD0 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LRRC39Q96DD0 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRRC39Q96DD0 AC083906.6-201ENST00000641366 219 ntBASIC19.36■□□□□ 0.69
LRRC39Q96DD0 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LRRC39Q96DD0 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRRC39Q96DD0 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRRC39Q96DD0 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRRC39Q96DD0 WIZP1-201ENST00000531444 2299 ntBASIC19.36■□□□□ 0.69
LRRC39Q96DD0 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.36■□□□□ 0.69
LRRC39Q96DD0 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LRRC39Q96DD0 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LRRC39Q96DD0 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
LRRC39Q96DD0 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LRRC39Q96DD0 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LRRC39Q96DD0 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LRRC39Q96DD0 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LRRC39Q96DD0 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LRRC39Q96DD0 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LRRC39Q96DD0 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.35■□□□□ 0.69
LRRC39Q96DD0 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.35■□□□□ 0.69
LRRC39Q96DD0 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.35■□□□□ 0.69
LRRC39Q96DD0 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LRRC39Q96DD0 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.35■□□□□ 0.69
LRRC39Q96DD0 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LRRC39Q96DD0 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.35■□□□□ 0.69
LRRC39Q96DD0 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.35■□□□□ 0.69
LRRC39Q96DD0 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
LRRC39Q96DD0 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.35■□□□□ 0.69
LRRC39Q96DD0 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LRRC39Q96DD0 AC090164.3-201ENST00000610780 2143 ntBASIC19.35■□□□□ 0.69
LRRC39Q96DD0 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
LRRC39Q96DD0 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LRRC39Q96DD0 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LRRC39Q96DD0 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.35■□□□□ 0.69
LRRC39Q96DD0 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
LRRC39Q96DD0 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 146.9 ms