Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 Z98044.1-201ENST00000632503 1764 ntBASIC17.23■□□□□ 0.35
PTP4A1Q93096 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.23■□□□□ 0.35
PTP4A1Q93096 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PTP4A1Q93096 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTP4A1Q93096 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PTP4A1Q93096 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.23■□□□□ 0.35
PTP4A1Q93096 YBX1P10-201ENST00000444752 975 ntBASIC17.23■□□□□ 0.35
PTP4A1Q93096 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTP4A1Q93096 EMC9-206ENST00000560403 872 ntTSL 2 BASIC17.23■□□□□ 0.35
PTP4A1Q93096 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.23■□□□□ 0.35
PTP4A1Q93096 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTP4A1Q93096 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PTP4A1Q93096 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTP4A1Q93096 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTP4A1Q93096 LTB4R2-202ENST00000528054 3092 ntBASIC17.23■□□□□ 0.35
PTP4A1Q93096 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PTP4A1Q93096 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTP4A1Q93096 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTP4A1Q93096 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.23■□□□□ 0.35
PTP4A1Q93096 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
PTP4A1Q93096 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
PTP4A1Q93096 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTP4A1Q93096 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
PTP4A1Q93096 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PTP4A1Q93096 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
PTP4A1Q93096 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTP4A1Q93096 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.22■□□□□ 0.35
PTP4A1Q93096 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
PTP4A1Q93096 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
PTP4A1Q93096 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTP4A1Q93096 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTP4A1Q93096 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTP4A1Q93096 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTP4A1Q93096 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.22■□□□□ 0.35
PTP4A1Q93096 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTP4A1Q93096 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
PTP4A1Q93096 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTP4A1Q93096 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.22■□□□□ 0.35
PTP4A1Q93096 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PTP4A1Q93096 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.22■□□□□ 0.35
PTP4A1Q93096 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PTP4A1Q93096 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTP4A1Q93096 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
PTP4A1Q93096 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTP4A1Q93096 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTP4A1Q93096 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PTP4A1Q93096 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTP4A1Q93096 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.22■□□□□ 0.35
PTP4A1Q93096 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTP4A1Q93096 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTP4A1Q93096 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.22■□□□□ 0.35
PTP4A1Q93096 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
PTP4A1Q93096 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTP4A1Q93096 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
PTP4A1Q93096 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTP4A1Q93096 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PTP4A1Q93096 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.21■□□□□ 0.35
PTP4A1Q93096 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.21■□□□□ 0.35
PTP4A1Q93096 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTP4A1Q93096 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTP4A1Q93096 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTP4A1Q93096 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTP4A1Q93096 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.21■□□□□ 0.35
PTP4A1Q93096 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PTP4A1Q93096 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTP4A1Q93096 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTP4A1Q93096 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTP4A1Q93096 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTP4A1Q93096 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC17.21■□□□□ 0.35
PTP4A1Q93096 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.21■□□□□ 0.35
PTP4A1Q93096 AC098934.4-201ENST00000564127 592 ntBASIC17.21■□□□□ 0.35
PTP4A1Q93096 HLA-B-256ENST00000639848 1089 ntBASIC17.21■□□□□ 0.35
PTP4A1Q93096 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
PTP4A1Q93096 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
PTP4A1Q93096 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.34
PTP4A1Q93096 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.21■□□□□ 0.34
PTP4A1Q93096 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
PTP4A1Q93096 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
PTP4A1Q93096 AL512353.2-201ENST00000448759 1962 ntBASIC17.2■□□□□ 0.34
PTP4A1Q93096 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTP4A1Q93096 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTP4A1Q93096 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.2■□□□□ 0.34
PTP4A1Q93096 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC17.2■□□□□ 0.34
PTP4A1Q93096 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
PTP4A1Q93096 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTP4A1Q93096 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTP4A1Q93096 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTP4A1Q93096 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PTP4A1Q93096 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
PTP4A1Q93096 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
PTP4A1Q93096 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PTP4A1Q93096 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PTP4A1Q93096 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.2■□□□□ 0.34
PTP4A1Q93096 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC17.2■□□□□ 0.34
PTP4A1Q93096 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.2■□□□□ 0.34
PTP4A1Q93096 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
PTP4A1Q93096 AC083880.1-201ENST00000608266 535 ntBASIC17.2■□□□□ 0.34
PTP4A1Q93096 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.2■□□□□ 0.34
PTP4A1Q93096 FEM1AP3-201ENST00000403722 1741 ntBASIC17.2■□□□□ 0.34
PTP4A1Q93096 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms