Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 TNXA-203ENST00000507684 2038 ntBASIC18.1■□□□□ 0.49
TM9SF4Q92544 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TM9SF4Q92544 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.1■□□□□ 0.49
TM9SF4Q92544 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TM9SF4Q92544 AC116351.2-201ENST00000606540 1585 ntBASIC18.1■□□□□ 0.49
TM9SF4Q92544 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
TM9SF4Q92544 KRT8P9-201ENST00000558927 1449 ntBASIC18.1■□□□□ 0.49
TM9SF4Q92544 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TM9SF4Q92544 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TM9SF4Q92544 AL390955.1-201ENST00000428694 934 ntBASIC18.1■□□□□ 0.49
TM9SF4Q92544 LIN28AP1-201ENST00000429574 405 ntBASIC18.1■□□□□ 0.49
TM9SF4Q92544 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.1■□□□□ 0.49
TM9SF4Q92544 KRT18P35-201ENST00000510488 1269 ntBASIC18.1■□□□□ 0.49
TM9SF4Q92544 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.1■□□□□ 0.49
TM9SF4Q92544 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.1■□□□□ 0.49
TM9SF4Q92544 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TM9SF4Q92544 AC131212.4-201ENST00000623606 975 ntBASIC18.1■□□□□ 0.49
TM9SF4Q92544 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TM9SF4Q92544 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TM9SF4Q92544 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.1■□□□□ 0.49
TM9SF4Q92544 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TM9SF4Q92544 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TM9SF4Q92544 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
TM9SF4Q92544 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TM9SF4Q92544 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
TM9SF4Q92544 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TM9SF4Q92544 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TM9SF4Q92544 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TM9SF4Q92544 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TM9SF4Q92544 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TM9SF4Q92544 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
TM9SF4Q92544 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.09■□□□□ 0.49
TM9SF4Q92544 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TM9SF4Q92544 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TM9SF4Q92544 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TM9SF4Q92544 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.09■□□□□ 0.49
TM9SF4Q92544 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.09■□□□□ 0.49
TM9SF4Q92544 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.09■□□□□ 0.49
TM9SF4Q92544 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.09■□□□□ 0.49
TM9SF4Q92544 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.09■□□□□ 0.49
TM9SF4Q92544 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.09■□□□□ 0.49
TM9SF4Q92544 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TM9SF4Q92544 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.09■□□□□ 0.49
TM9SF4Q92544 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TM9SF4Q92544 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TM9SF4Q92544 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TM9SF4Q92544 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.09■□□□□ 0.49
TM9SF4Q92544 DPP3P2-201ENST00000416030 1696 ntBASIC18.09■□□□□ 0.49
TM9SF4Q92544 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.09■□□□□ 0.49
TM9SF4Q92544 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
TM9SF4Q92544 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TM9SF4Q92544 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.49
TM9SF4Q92544 AC004408.2-201ENST00000623613 2777 ntBASIC18.08■□□□□ 0.49
TM9SF4Q92544 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TM9SF4Q92544 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
TM9SF4Q92544 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TM9SF4Q92544 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TM9SF4Q92544 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.08■□□□□ 0.49
TM9SF4Q92544 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.08■□□□□ 0.49
TM9SF4Q92544 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TM9SF4Q92544 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TM9SF4Q92544 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TM9SF4Q92544 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.08■□□□□ 0.48
TM9SF4Q92544 SLC25A3P1-201ENST00000443844 931 ntBASIC18.08■□□□□ 0.48
TM9SF4Q92544 AC128688.1-201ENST00000487626 519 ntBASIC18.08■□□□□ 0.48
TM9SF4Q92544 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.08■□□□□ 0.48
TM9SF4Q92544 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.08■□□□□ 0.48
TM9SF4Q92544 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.08■□□□□ 0.48
TM9SF4Q92544 AC010947.1-201ENST00000623454 693 ntBASIC18.08■□□□□ 0.48
TM9SF4Q92544 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.08■□□□□ 0.48
TM9SF4Q92544 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.08■□□□□ 0.48
TM9SF4Q92544 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TM9SF4Q92544 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TM9SF4Q92544 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TM9SF4Q92544 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TM9SF4Q92544 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TM9SF4Q92544 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TM9SF4Q92544 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.08■□□□□ 0.48
TM9SF4Q92544 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TM9SF4Q92544 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.07■□□□□ 0.48
TM9SF4Q92544 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TM9SF4Q92544 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TM9SF4Q92544 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TM9SF4Q92544 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TM9SF4Q92544 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.07■□□□□ 0.48
TM9SF4Q92544 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TM9SF4Q92544 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TM9SF4Q92544 AC005332.7-201ENST00000614046 2005 ntBASIC18.07■□□□□ 0.48
TM9SF4Q92544 TERF1P1-201ENST00000311003 1181 ntBASIC18.07■□□□□ 0.48
TM9SF4Q92544 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TM9SF4Q92544 ATP5G1P1-201ENST00000448724 379 ntBASIC18.07■□□□□ 0.48
TM9SF4Q92544 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.07■□□□□ 0.48
TM9SF4Q92544 AP005242.2-201ENST00000580065 1175 ntBASIC18.07■□□□□ 0.48
TM9SF4Q92544 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.07■□□□□ 0.48
TM9SF4Q92544 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TM9SF4Q92544 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.07■□□□□ 0.48
TM9SF4Q92544 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
TM9SF4Q92544 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.07■□□□□ 0.48
TM9SF4Q92544 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TM9SF4Q92544 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms