Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SCG3Q8WXD2 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SCG3Q8WXD2 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.63■□□□□ 0.73
SCG3Q8WXD2 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
SCG3Q8WXD2 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SCG3Q8WXD2 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.63■□□□□ 0.73
SCG3Q8WXD2 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.63■□□□□ 0.73
SCG3Q8WXD2 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.63■□□□□ 0.73
SCG3Q8WXD2 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.63■□□□□ 0.73
SCG3Q8WXD2 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SCG3Q8WXD2 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SCG3Q8WXD2 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SCG3Q8WXD2 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SCG3Q8WXD2 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SCG3Q8WXD2 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SCG3Q8WXD2 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SCG3Q8WXD2 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SCG3Q8WXD2 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
SCG3Q8WXD2 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
SCG3Q8WXD2 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SCG3Q8WXD2 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SCG3Q8WXD2 AC018553.1-201ENST00000616682 1458 ntBASIC19.62■□□□□ 0.73
SCG3Q8WXD2 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SCG3Q8WXD2 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SCG3Q8WXD2 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SCG3Q8WXD2 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SCG3Q8WXD2 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SCG3Q8WXD2 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SCG3Q8WXD2 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SCG3Q8WXD2 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.62■□□□□ 0.73
SCG3Q8WXD2 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SCG3Q8WXD2 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SCG3Q8WXD2 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.62■□□□□ 0.73
SCG3Q8WXD2 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SCG3Q8WXD2 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
SCG3Q8WXD2 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SCG3Q8WXD2 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
SCG3Q8WXD2 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SCG3Q8WXD2 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SCG3Q8WXD2 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.61■□□□□ 0.73
SCG3Q8WXD2 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
SCG3Q8WXD2 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SCG3Q8WXD2 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.61■□□□□ 0.73
SCG3Q8WXD2 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SCG3Q8WXD2 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SCG3Q8WXD2 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SCG3Q8WXD2 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SCG3Q8WXD2 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SCG3Q8WXD2 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SCG3Q8WXD2 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SCG3Q8WXD2 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.61■□□□□ 0.73
SCG3Q8WXD2 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.61■□□□□ 0.73
SCG3Q8WXD2 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.61■□□□□ 0.73
SCG3Q8WXD2 RARRES2P10-201ENST00000564312 460 ntBASIC19.61■□□□□ 0.73
SCG3Q8WXD2 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.61■□□□□ 0.73
SCG3Q8WXD2 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.61■□□□□ 0.73
SCG3Q8WXD2 AL121906.2-201ENST00000621597 723 ntBASIC19.61■□□□□ 0.73
SCG3Q8WXD2 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SCG3Q8WXD2 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SCG3Q8WXD2 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.61■□□□□ 0.73
SCG3Q8WXD2 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SCG3Q8WXD2 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.61■□□□□ 0.73
SCG3Q8WXD2 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SCG3Q8WXD2 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SCG3Q8WXD2 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
SCG3Q8WXD2 TFP1-202ENST00000475455 1573 ntBASIC19.61■□□□□ 0.73
SCG3Q8WXD2 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.61■□□□□ 0.73
SCG3Q8WXD2 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SCG3Q8WXD2 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.61■□□□□ 0.73
SCG3Q8WXD2 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
SCG3Q8WXD2 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.61■□□□□ 0.73
SCG3Q8WXD2 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.61■□□□□ 0.73
SCG3Q8WXD2 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
SCG3Q8WXD2 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.6■□□□□ 0.73
SCG3Q8WXD2 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
SCG3Q8WXD2 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SCG3Q8WXD2 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.6■□□□□ 0.73
SCG3Q8WXD2 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SCG3Q8WXD2 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.6■□□□□ 0.73
SCG3Q8WXD2 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.6■□□□□ 0.73
SCG3Q8WXD2 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SCG3Q8WXD2 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SCG3Q8WXD2 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.6■□□□□ 0.73
SCG3Q8WXD2 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SCG3Q8WXD2 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.6■□□□□ 0.73
SCG3Q8WXD2 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.6■□□□□ 0.73
SCG3Q8WXD2 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.6■□□□□ 0.73
SCG3Q8WXD2 AL049637.2-201ENST00000641778 930 ntBASIC19.6■□□□□ 0.73
SCG3Q8WXD2 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SCG3Q8WXD2 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
SCG3Q8WXD2 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SCG3Q8WXD2 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SCG3Q8WXD2 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SCG3Q8WXD2 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
SCG3Q8WXD2 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SCG3Q8WXD2 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.6■□□□□ 0.73
SCG3Q8WXD2 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SCG3Q8WXD2 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
SCG3Q8WXD2 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
SCG3Q8WXD2 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms