Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
CKAP2Q8WWK9 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CKAP2Q8WWK9 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CKAP2Q8WWK9 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
CKAP2Q8WWK9 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CKAP2Q8WWK9 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CKAP2Q8WWK9 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CKAP2Q8WWK9 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CKAP2Q8WWK9 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.07■□□□□ 0.64
CKAP2Q8WWK9 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.07■□□□□ 0.64
CKAP2Q8WWK9 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.07■□□□□ 0.64
CKAP2Q8WWK9 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CKAP2Q8WWK9 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CKAP2Q8WWK9 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.07■□□□□ 0.64
CKAP2Q8WWK9 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CKAP2Q8WWK9 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CKAP2Q8WWK9 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.07■□□□□ 0.64
CKAP2Q8WWK9 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CKAP2Q8WWK9 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CKAP2Q8WWK9 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CKAP2Q8WWK9 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.06■□□□□ 0.64
CKAP2Q8WWK9 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CKAP2Q8WWK9 FEM1AP3-201ENST00000403722 1741 ntBASIC19.06■□□□□ 0.64
CKAP2Q8WWK9 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
CKAP2Q8WWK9 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.06■□□□□ 0.64
CKAP2Q8WWK9 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CKAP2Q8WWK9 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CKAP2Q8WWK9 RARRES2P4-201ENST00000514074 484 ntBASIC19.06■□□□□ 0.64
CKAP2Q8WWK9 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.06■□□□□ 0.64
CKAP2Q8WWK9 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CKAP2Q8WWK9 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.06■□□□□ 0.64
CKAP2Q8WWK9 AC083906.6-201ENST00000641366 219 ntBASIC19.06■□□□□ 0.64
CKAP2Q8WWK9 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CKAP2Q8WWK9 AC073592.3-201ENST00000625118 1834 ntBASIC19.06■□□□□ 0.64
CKAP2Q8WWK9 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CKAP2Q8WWK9 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CKAP2Q8WWK9 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CKAP2Q8WWK9 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.06■□□□□ 0.64
CKAP2Q8WWK9 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CKAP2Q8WWK9 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CKAP2Q8WWK9 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CKAP2Q8WWK9 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.06■□□□□ 0.64
CKAP2Q8WWK9 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.05■□□□□ 0.64
CKAP2Q8WWK9 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CKAP2Q8WWK9 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.05■□□□□ 0.64
CKAP2Q8WWK9 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CKAP2Q8WWK9 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CKAP2Q8WWK9 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CKAP2Q8WWK9 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CKAP2Q8WWK9 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.05■□□□□ 0.64
CKAP2Q8WWK9 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.05■□□□□ 0.64
CKAP2Q8WWK9 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CKAP2Q8WWK9 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
CKAP2Q8WWK9 MIR935-201ENST00000401179 91 ntBASIC19.05■□□□□ 0.64
CKAP2Q8WWK9 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CKAP2Q8WWK9 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CKAP2Q8WWK9 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.05■□□□□ 0.64
CKAP2Q8WWK9 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.05■□□□□ 0.64
CKAP2Q8WWK9 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.05■□□□□ 0.64
CKAP2Q8WWK9 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
CKAP2Q8WWK9 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.05■□□□□ 0.64
CKAP2Q8WWK9 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.05■□□□□ 0.64
CKAP2Q8WWK9 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CKAP2Q8WWK9 AL162741.1-201ENST00000565563 1558 ntBASIC19.05■□□□□ 0.64
CKAP2Q8WWK9 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CKAP2Q8WWK9 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CKAP2Q8WWK9 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.05■□□□□ 0.64
CKAP2Q8WWK9 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC19.05■□□□□ 0.64
CKAP2Q8WWK9 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CKAP2Q8WWK9 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CKAP2Q8WWK9 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.05■□□□□ 0.64
CKAP2Q8WWK9 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CKAP2Q8WWK9 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.04■□□□□ 0.64
CKAP2Q8WWK9 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.04■□□□□ 0.64
CKAP2Q8WWK9 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CKAP2Q8WWK9 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
CKAP2Q8WWK9 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CKAP2Q8WWK9 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CKAP2Q8WWK9 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CKAP2Q8WWK9 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
CKAP2Q8WWK9 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CKAP2Q8WWK9 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CKAP2Q8WWK9 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.04■□□□□ 0.64
CKAP2Q8WWK9 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CKAP2Q8WWK9 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CKAP2Q8WWK9 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CKAP2Q8WWK9 KRT18P14-201ENST00000534205 1250 ntBASIC19.04■□□□□ 0.64
CKAP2Q8WWK9 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.04■□□□□ 0.64
CKAP2Q8WWK9 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
CKAP2Q8WWK9 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CKAP2Q8WWK9 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC19.04■□□□□ 0.64
CKAP2Q8WWK9 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CKAP2Q8WWK9 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.04■□□□□ 0.64
CKAP2Q8WWK9 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.04■□□□□ 0.64
CKAP2Q8WWK9 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.04■□□□□ 0.64
CKAP2Q8WWK9 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CKAP2Q8WWK9 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CKAP2Q8WWK9 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CKAP2Q8WWK9 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CKAP2Q8WWK9 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms