Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNIH3Q8TBE1 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNIH3Q8TBE1 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
CNIH3Q8TBE1 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC17.54■□□□□ 0.4
CNIH3Q8TBE1 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CNIH3Q8TBE1 MFSD11-216ENST00000590393 1141 ntBASIC17.54■□□□□ 0.4
CNIH3Q8TBE1 AC105020.6-201ENST00000621523 1217 ntBASIC17.54■□□□□ 0.4
CNIH3Q8TBE1 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CNIH3Q8TBE1 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNIH3Q8TBE1 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.54■□□□□ 0.4
CNIH3Q8TBE1 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
CNIH3Q8TBE1 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNIH3Q8TBE1 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CNIH3Q8TBE1 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CNIH3Q8TBE1 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CNIH3Q8TBE1 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.53■□□□□ 0.4
CNIH3Q8TBE1 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CNIH3Q8TBE1 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CNIH3Q8TBE1 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.53■□□□□ 0.4
CNIH3Q8TBE1 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CNIH3Q8TBE1 HCG11-201ENST00000411553 5696 ntBASIC17.53■□□□□ 0.4
CNIH3Q8TBE1 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CNIH3Q8TBE1 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CNIH3Q8TBE1 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CNIH3Q8TBE1 UQCRFS1P1-201ENST00000435169 820 ntBASIC17.53■□□□□ 0.4
CNIH3Q8TBE1 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC17.53■□□□□ 0.4
CNIH3Q8TBE1 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CNIH3Q8TBE1 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CNIH3Q8TBE1 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CNIH3Q8TBE1 TFG-210ENST00000620299 1289 ntTSL 5 BASIC17.53■□□□□ 0.4
CNIH3Q8TBE1 MYCNOS-205ENST00000641950 531 ntBASIC17.53■□□□□ 0.4
CNIH3Q8TBE1 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CNIH3Q8TBE1 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CNIH3Q8TBE1 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CNIH3Q8TBE1 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CNIH3Q8TBE1 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CNIH3Q8TBE1 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.53■□□□□ 0.4
CNIH3Q8TBE1 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CNIH3Q8TBE1 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CNIH3Q8TBE1 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CNIH3Q8TBE1 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CNIH3Q8TBE1 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CNIH3Q8TBE1 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.53■□□□□ 0.4
CNIH3Q8TBE1 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CNIH3Q8TBE1 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CNIH3Q8TBE1 ANO7L1-203ENST00000602586 1720 ntBASIC17.52■□□□□ 0.4
CNIH3Q8TBE1 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CNIH3Q8TBE1 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CNIH3Q8TBE1 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.52■□□□□ 0.4
CNIH3Q8TBE1 SDHAP1-207ENST00000440850 2000 ntBASIC17.52■□□□□ 0.4
CNIH3Q8TBE1 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.52■□□□□ 0.4
CNIH3Q8TBE1 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CNIH3Q8TBE1 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CNIH3Q8TBE1 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CNIH3Q8TBE1 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CNIH3Q8TBE1 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CNIH3Q8TBE1 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CNIH3Q8TBE1 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CNIH3Q8TBE1 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CNIH3Q8TBE1 MCRIP2P1-201ENST00000394346 511 ntBASIC17.52■□□□□ 0.4
CNIH3Q8TBE1 TERF1P5-201ENST00000477545 1207 ntBASIC17.52■□□□□ 0.4
CNIH3Q8TBE1 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CNIH3Q8TBE1 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.52■□□□□ 0.4
CNIH3Q8TBE1 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CNIH3Q8TBE1 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CNIH3Q8TBE1 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CNIH3Q8TBE1 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CNIH3Q8TBE1 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.39
CNIH3Q8TBE1 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CNIH3Q8TBE1 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CNIH3Q8TBE1 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
CNIH3Q8TBE1 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
CNIH3Q8TBE1 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.52■□□□□ 0.39
CNIH3Q8TBE1 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CNIH3Q8TBE1 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CNIH3Q8TBE1 AC139713.2-201ENST00000641328 2723 ntBASIC17.51■□□□□ 0.39
CNIH3Q8TBE1 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CNIH3Q8TBE1 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.51■□□□□ 0.39
CNIH3Q8TBE1 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CNIH3Q8TBE1 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CNIH3Q8TBE1 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
CNIH3Q8TBE1 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
CNIH3Q8TBE1 PBX1-209ENST00000485769 834 ntTSL 2 BASIC17.51■□□□□ 0.39
CNIH3Q8TBE1 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CNIH3Q8TBE1 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CNIH3Q8TBE1 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CNIH3Q8TBE1 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CNIH3Q8TBE1 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
CNIH3Q8TBE1 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.51■□□□□ 0.39
CNIH3Q8TBE1 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.51■□□□□ 0.39
CNIH3Q8TBE1 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
CNIH3Q8TBE1 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.51■□□□□ 0.39
CNIH3Q8TBE1 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CNIH3Q8TBE1 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CNIH3Q8TBE1 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CNIH3Q8TBE1 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
CNIH3Q8TBE1 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CNIH3Q8TBE1 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CNIH3Q8TBE1 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.51■□□□□ 0.39
CNIH3Q8TBE1 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms