Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LMO3Q8TAP4 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LMO3Q8TAP4 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.6■□□□□ 0.89
LMO3Q8TAP4 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LMO3Q8TAP4 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
LMO3Q8TAP4 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.6■□□□□ 0.89
LMO3Q8TAP4 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.6■□□□□ 0.89
LMO3Q8TAP4 FAM197Y4-202ENST00000622692 608 ntBASIC20.6■□□□□ 0.89
LMO3Q8TAP4 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
LMO3Q8TAP4 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LMO3Q8TAP4 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.6■□□□□ 0.89
LMO3Q8TAP4 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LMO3Q8TAP4 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.6■□□□□ 0.89
LMO3Q8TAP4 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LMO3Q8TAP4 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
LMO3Q8TAP4 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC20.6■□□□□ 0.89
LMO3Q8TAP4 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
LMO3Q8TAP4 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
LMO3Q8TAP4 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
LMO3Q8TAP4 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LMO3Q8TAP4 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LMO3Q8TAP4 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LMO3Q8TAP4 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.59■□□□□ 0.89
LMO3Q8TAP4 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LMO3Q8TAP4 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LMO3Q8TAP4 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
LMO3Q8TAP4 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.59■□□□□ 0.89
LMO3Q8TAP4 AC008040.2-201ENST00000461049 708 ntBASIC20.59■□□□□ 0.89
LMO3Q8TAP4 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.59■□□□□ 0.89
LMO3Q8TAP4 AC073195.1-201ENST00000607241 877 ntBASIC20.59■□□□□ 0.89
LMO3Q8TAP4 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LMO3Q8TAP4 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LMO3Q8TAP4 KRT8P11-201ENST00000409686 1436 ntBASIC20.59■□□□□ 0.89
LMO3Q8TAP4 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.59■□□□□ 0.89
LMO3Q8TAP4 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
LMO3Q8TAP4 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
LMO3Q8TAP4 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LMO3Q8TAP4 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LMO3Q8TAP4 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.58■□□□□ 0.89
LMO3Q8TAP4 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
LMO3Q8TAP4 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.58■□□□□ 0.89
LMO3Q8TAP4 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LMO3Q8TAP4 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.58■□□□□ 0.89
LMO3Q8TAP4 AC091390.4-202ENST00000476426 537 ntBASIC20.58■□□□□ 0.89
LMO3Q8TAP4 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
LMO3Q8TAP4 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.58■□□□□ 0.89
LMO3Q8TAP4 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
LMO3Q8TAP4 CR392000.1-201ENST00000624770 1228 ntBASIC20.58■□□□□ 0.89
LMO3Q8TAP4 KRT16P1-201ENST00000399124 1418 ntBASIC20.58■□□□□ 0.88
LMO3Q8TAP4 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
LMO3Q8TAP4 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
LMO3Q8TAP4 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
LMO3Q8TAP4 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.58■□□□□ 0.88
LMO3Q8TAP4 RCC2P6-201ENST00000526625 1557 ntBASIC20.58■□□□□ 0.88
LMO3Q8TAP4 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
LMO3Q8TAP4 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
LMO3Q8TAP4 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.58■□□□□ 0.88
LMO3Q8TAP4 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LMO3Q8TAP4 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
LMO3Q8TAP4 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LMO3Q8TAP4 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LMO3Q8TAP4 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LMO3Q8TAP4 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
LMO3Q8TAP4 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LMO3Q8TAP4 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LMO3Q8TAP4 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.57■□□□□ 0.88
LMO3Q8TAP4 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.57■□□□□ 0.88
LMO3Q8TAP4 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LMO3Q8TAP4 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
LMO3Q8TAP4 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LMO3Q8TAP4 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
LMO3Q8TAP4 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LMO3Q8TAP4 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.56■□□□□ 0.88
LMO3Q8TAP4 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
LMO3Q8TAP4 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
LMO3Q8TAP4 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
LMO3Q8TAP4 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LMO3Q8TAP4 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
LMO3Q8TAP4 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.56■□□□□ 0.88
LMO3Q8TAP4 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
LMO3Q8TAP4 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.56■□□□□ 0.88
LMO3Q8TAP4 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LMO3Q8TAP4 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LMO3Q8TAP4 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LMO3Q8TAP4 MESTP1-201ENST00000404287 994 ntBASIC20.56■□□□□ 0.88
LMO3Q8TAP4 AL158047.1-201ENST00000445918 881 ntBASIC20.56■□□□□ 0.88
LMO3Q8TAP4 AC011506.1-201ENST00000474329 610 ntBASIC20.56■□□□□ 0.88
LMO3Q8TAP4 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.56■□□□□ 0.88
LMO3Q8TAP4 AC130371.2-201ENST00000619443 611 ntBASIC20.56■□□□□ 0.88
LMO3Q8TAP4 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.56■□□□□ 0.88
LMO3Q8TAP4 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.56■□□□□ 0.88
LMO3Q8TAP4 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
LMO3Q8TAP4 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
LMO3Q8TAP4 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LMO3Q8TAP4 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LMO3Q8TAP4 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LMO3Q8TAP4 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
LMO3Q8TAP4 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20.55■□□□□ 0.88
LMO3Q8TAP4 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.55■□□□□ 0.88
LMO3Q8TAP4 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms