Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
SNIP1Q8TAD8 FBXW4P1-201ENST00000426721 2239 ntBASIC18.1■□□□□ 0.49
SNIP1Q8TAD8 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SNIP1Q8TAD8 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.1■□□□□ 0.49
SNIP1Q8TAD8 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.09■□□□□ 0.49
SNIP1Q8TAD8 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNIP1Q8TAD8 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNIP1Q8TAD8 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNIP1Q8TAD8 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNIP1Q8TAD8 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
SNIP1Q8TAD8 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
SNIP1Q8TAD8 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
SNIP1Q8TAD8 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
SNIP1Q8TAD8 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNIP1Q8TAD8 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNIP1Q8TAD8 AP000593.1-201ENST00000393668 712 ntBASIC18.09■□□□□ 0.49
SNIP1Q8TAD8 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.09■□□□□ 0.49
SNIP1Q8TAD8 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SNIP1Q8TAD8 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNIP1Q8TAD8 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.09■□□□□ 0.49
SNIP1Q8TAD8 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.09■□□□□ 0.49
SNIP1Q8TAD8 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
SNIP1Q8TAD8 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.09■□□□□ 0.49
SNIP1Q8TAD8 AL121672.3-201ENST00000608644 468 ntBASIC18.09■□□□□ 0.49
SNIP1Q8TAD8 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
SNIP1Q8TAD8 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNIP1Q8TAD8 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNIP1Q8TAD8 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
SNIP1Q8TAD8 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.09■□□□□ 0.49
SNIP1Q8TAD8 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNIP1Q8TAD8 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.09■□□□□ 0.49
SNIP1Q8TAD8 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.09■□□□□ 0.49
SNIP1Q8TAD8 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SNIP1Q8TAD8 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
SNIP1Q8TAD8 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.08■□□□□ 0.49
SNIP1Q8TAD8 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SNIP1Q8TAD8 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SNIP1Q8TAD8 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SNIP1Q8TAD8 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SNIP1Q8TAD8 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SNIP1Q8TAD8 NUS1P1-201ENST00000446295 882 ntBASIC18.08■□□□□ 0.48
SNIP1Q8TAD8 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.08■□□□□ 0.48
SNIP1Q8TAD8 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SNIP1Q8TAD8 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.08■□□□□ 0.48
SNIP1Q8TAD8 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.08■□□□□ 0.48
SNIP1Q8TAD8 MIR3180-1-201ENST00000580374 94 ntBASIC18.08■□□□□ 0.48
SNIP1Q8TAD8 MIR3180-3-201ENST00000584616 94 ntBASIC18.08■□□□□ 0.48
SNIP1Q8TAD8 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
SNIP1Q8TAD8 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.08■□□□□ 0.48
SNIP1Q8TAD8 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.08■□□□□ 0.48
SNIP1Q8TAD8 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SNIP1Q8TAD8 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SNIP1Q8TAD8 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SNIP1Q8TAD8 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.08■□□□□ 0.48
SNIP1Q8TAD8 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SNIP1Q8TAD8 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SNIP1Q8TAD8 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.08■□□□□ 0.48
SNIP1Q8TAD8 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
SNIP1Q8TAD8 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SNIP1Q8TAD8 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC18.07■□□□□ 0.48
SNIP1Q8TAD8 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.07■□□□□ 0.48
SNIP1Q8TAD8 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SNIP1Q8TAD8 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SNIP1Q8TAD8 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SNIP1Q8TAD8 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SNIP1Q8TAD8 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SNIP1Q8TAD8 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.07■□□□□ 0.48
SNIP1Q8TAD8 AL022342.1-201ENST00000400363 863 ntBASIC18.07■□□□□ 0.48
SNIP1Q8TAD8 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.07■□□□□ 0.48
SNIP1Q8TAD8 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.07■□□□□ 0.48
SNIP1Q8TAD8 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SNIP1Q8TAD8 BX276092.5-203ENST00000456199 560 ntBASIC18.07■□□□□ 0.48
SNIP1Q8TAD8 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SNIP1Q8TAD8 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18.07■□□□□ 0.48
SNIP1Q8TAD8 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
SNIP1Q8TAD8 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SNIP1Q8TAD8 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
SNIP1Q8TAD8 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.07■□□□□ 0.48
SNIP1Q8TAD8 PLK5-205ENST00000642079 1969 ntBASIC18.07■□□□□ 0.48
SNIP1Q8TAD8 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SNIP1Q8TAD8 KRT8P41-201ENST00000533985 1514 ntBASIC18.07■□□□□ 0.48
SNIP1Q8TAD8 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
SNIP1Q8TAD8 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SNIP1Q8TAD8 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
SNIP1Q8TAD8 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SNIP1Q8TAD8 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SNIP1Q8TAD8 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SNIP1Q8TAD8 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SNIP1Q8TAD8 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SNIP1Q8TAD8 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SNIP1Q8TAD8 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.06■□□□□ 0.48
SNIP1Q8TAD8 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.06■□□□□ 0.48
SNIP1Q8TAD8 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SNIP1Q8TAD8 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SNIP1Q8TAD8 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SNIP1Q8TAD8 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SNIP1Q8TAD8 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.06■□□□□ 0.48
SNIP1Q8TAD8 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SNIP1Q8TAD8 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.06■□□□□ 0.48
SNIP1Q8TAD8 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms