Protein–RNA interactions for Protein: Q8NF37

LPCAT1, Lysophosphatidylcholine acyltransferase 1, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1Q8NF37 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LPCAT1Q8NF37 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
LPCAT1Q8NF37 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LPCAT1Q8NF37 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
LPCAT1Q8NF37 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
LPCAT1Q8NF37 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
LPCAT1Q8NF37 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.37■□□□□ 0.69
LPCAT1Q8NF37 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.37■□□□□ 0.69
LPCAT1Q8NF37 AC026271.3-201ENST00000571884 352 ntBASIC19.37■□□□□ 0.69
LPCAT1Q8NF37 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
LPCAT1Q8NF37 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
LPCAT1Q8NF37 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
LPCAT1Q8NF37 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.37■□□□□ 0.69
LPCAT1Q8NF37 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
LPCAT1Q8NF37 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
LPCAT1Q8NF37 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.37■□□□□ 0.69
LPCAT1Q8NF37 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.37■□□□□ 0.69
LPCAT1Q8NF37 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.36■□□□□ 0.69
LPCAT1Q8NF37 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
LPCAT1Q8NF37 RCC2P6-201ENST00000526625 1557 ntBASIC19.36■□□□□ 0.69
LPCAT1Q8NF37 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
LPCAT1Q8NF37 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LPCAT1Q8NF37 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
LPCAT1Q8NF37 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LPCAT1Q8NF37 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
LPCAT1Q8NF37 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LPCAT1Q8NF37 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
LPCAT1Q8NF37 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.36■□□□□ 0.69
LPCAT1Q8NF37 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
LPCAT1Q8NF37 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
LPCAT1Q8NF37 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.36■□□□□ 0.69
LPCAT1Q8NF37 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.36■□□□□ 0.69
LPCAT1Q8NF37 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
LPCAT1Q8NF37 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
LPCAT1Q8NF37 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.36■□□□□ 0.69
LPCAT1Q8NF37 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.36■□□□□ 0.69
LPCAT1Q8NF37 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LPCAT1Q8NF37 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.36■□□□□ 0.69
LPCAT1Q8NF37 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
LPCAT1Q8NF37 TEX21P-204ENST00000641479 1693 ntBASIC19.36■□□□□ 0.69
LPCAT1Q8NF37 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.36■□□□□ 0.69
LPCAT1Q8NF37 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
LPCAT1Q8NF37 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
LPCAT1Q8NF37 KRT8P41-201ENST00000533985 1514 ntBASIC19.35■□□□□ 0.69
LPCAT1Q8NF37 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
LPCAT1Q8NF37 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LPCAT1Q8NF37 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
LPCAT1Q8NF37 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
LPCAT1Q8NF37 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LPCAT1Q8NF37 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
LPCAT1Q8NF37 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LPCAT1Q8NF37 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LPCAT1Q8NF37 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LPCAT1Q8NF37 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.35■□□□□ 0.69
LPCAT1Q8NF37 AL355355.2-201ENST00000442321 338 ntBASIC19.35■□□□□ 0.69
LPCAT1Q8NF37 NUDT16P1-203ENST00000513809 620 ntBASIC19.35■□□□□ 0.69
LPCAT1Q8NF37 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
LPCAT1Q8NF37 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LPCAT1Q8NF37 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.35■□□□□ 0.69
LPCAT1Q8NF37 AC026471.5-201ENST00000615068 467 ntBASIC19.35■□□□□ 0.69
LPCAT1Q8NF37 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.35■□□□□ 0.69
LPCAT1Q8NF37 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LPCAT1Q8NF37 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LPCAT1Q8NF37 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.35■□□□□ 0.69
LPCAT1Q8NF37 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
LPCAT1Q8NF37 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LPCAT1Q8NF37 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.35■□□□□ 0.69
LPCAT1Q8NF37 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LPCAT1Q8NF37 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
LPCAT1Q8NF37 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LPCAT1Q8NF37 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
LPCAT1Q8NF37 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LPCAT1Q8NF37 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LPCAT1Q8NF37 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LPCAT1Q8NF37 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LPCAT1Q8NF37 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.34■□□□□ 0.69
LPCAT1Q8NF37 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LPCAT1Q8NF37 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.34■□□□□ 0.69
LPCAT1Q8NF37 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
LPCAT1Q8NF37 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
LPCAT1Q8NF37 AC004951.3-201ENST00000418645 1148 ntBASIC19.34■□□□□ 0.69
LPCAT1Q8NF37 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.34■□□□□ 0.69
LPCAT1Q8NF37 AC011506.1-201ENST00000474329 610 ntBASIC19.34■□□□□ 0.69
LPCAT1Q8NF37 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.34■□□□□ 0.69
LPCAT1Q8NF37 MIR6786-201ENST00000616843 113 ntBASIC19.34■□□□□ 0.69
LPCAT1Q8NF37 AC011298.2-201ENST00000617989 482 ntBASIC19.34■□□□□ 0.69
LPCAT1Q8NF37 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.34■□□□□ 0.69
LPCAT1Q8NF37 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.34■□□□□ 0.69
LPCAT1Q8NF37 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LPCAT1Q8NF37 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
LPCAT1Q8NF37 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LPCAT1Q8NF37 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.34■□□□□ 0.69
LPCAT1Q8NF37 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LPCAT1Q8NF37 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LPCAT1Q8NF37 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.34■□□□□ 0.69
LPCAT1Q8NF37 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
LPCAT1Q8NF37 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
LPCAT1Q8NF37 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LPCAT1Q8NF37 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
LPCAT1Q8NF37 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms