Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
SIMC1Q8NDZ2 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.08■□□□□ 0.48
SIMC1Q8NDZ2 AC004264.1-201ENST00000608354 794 ntBASIC18.08■□□□□ 0.48
SIMC1Q8NDZ2 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.08■□□□□ 0.48
SIMC1Q8NDZ2 HLA-A-209ENST00000638375 975 ntBASIC18.08■□□□□ 0.48
SIMC1Q8NDZ2 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SIMC1Q8NDZ2 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SIMC1Q8NDZ2 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SIMC1Q8NDZ2 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SIMC1Q8NDZ2 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SIMC1Q8NDZ2 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SIMC1Q8NDZ2 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SIMC1Q8NDZ2 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.08■□□□□ 0.48
SIMC1Q8NDZ2 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SIMC1Q8NDZ2 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SIMC1Q8NDZ2 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
SIMC1Q8NDZ2 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SIMC1Q8NDZ2 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SIMC1Q8NDZ2 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SIMC1Q8NDZ2 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SIMC1Q8NDZ2 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
SIMC1Q8NDZ2 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SIMC1Q8NDZ2 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.07■□□□□ 0.48
SIMC1Q8NDZ2 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SIMC1Q8NDZ2 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.07■□□□□ 0.48
SIMC1Q8NDZ2 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
SIMC1Q8NDZ2 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
SIMC1Q8NDZ2 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.07■□□□□ 0.48
SIMC1Q8NDZ2 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SIMC1Q8NDZ2 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SIMC1Q8NDZ2 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SIMC1Q8NDZ2 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.07■□□□□ 0.48
SIMC1Q8NDZ2 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SIMC1Q8NDZ2 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.07■□□□□ 0.48
SIMC1Q8NDZ2 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.07■□□□□ 0.48
SIMC1Q8NDZ2 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.07■□□□□ 0.48
SIMC1Q8NDZ2 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.07■□□□□ 0.48
SIMC1Q8NDZ2 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
SIMC1Q8NDZ2 FAM197Y4-202ENST00000622692 608 ntBASIC18.07■□□□□ 0.48
SIMC1Q8NDZ2 AP006294.2-201ENST00000641667 209 ntBASIC18.07■□□□□ 0.48
SIMC1Q8NDZ2 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SIMC1Q8NDZ2 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.07■□□□□ 0.48
SIMC1Q8NDZ2 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SIMC1Q8NDZ2 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SIMC1Q8NDZ2 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SIMC1Q8NDZ2 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SIMC1Q8NDZ2 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
SIMC1Q8NDZ2 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
SIMC1Q8NDZ2 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SIMC1Q8NDZ2 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
SIMC1Q8NDZ2 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SIMC1Q8NDZ2 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SIMC1Q8NDZ2 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.07■□□□□ 0.48
SIMC1Q8NDZ2 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SIMC1Q8NDZ2 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SIMC1Q8NDZ2 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SIMC1Q8NDZ2 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SIMC1Q8NDZ2 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SIMC1Q8NDZ2 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SIMC1Q8NDZ2 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.06■□□□□ 0.48
SIMC1Q8NDZ2 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SIMC1Q8NDZ2 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
SIMC1Q8NDZ2 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.06■□□□□ 0.48
SIMC1Q8NDZ2 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.06■□□□□ 0.48
SIMC1Q8NDZ2 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SIMC1Q8NDZ2 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.06■□□□□ 0.48
SIMC1Q8NDZ2 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.06■□□□□ 0.48
SIMC1Q8NDZ2 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.06■□□□□ 0.48
SIMC1Q8NDZ2 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SIMC1Q8NDZ2 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
SIMC1Q8NDZ2 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SIMC1Q8NDZ2 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
SIMC1Q8NDZ2 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.06■□□□□ 0.48
SIMC1Q8NDZ2 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.06■□□□□ 0.48
SIMC1Q8NDZ2 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SIMC1Q8NDZ2 AC004408.2-201ENST00000623613 2777 ntBASIC18.06■□□□□ 0.48
SIMC1Q8NDZ2 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SIMC1Q8NDZ2 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SIMC1Q8NDZ2 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
SIMC1Q8NDZ2 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
SIMC1Q8NDZ2 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SIMC1Q8NDZ2 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SIMC1Q8NDZ2 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SIMC1Q8NDZ2 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
SIMC1Q8NDZ2 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SIMC1Q8NDZ2 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SIMC1Q8NDZ2 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
SIMC1Q8NDZ2 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SIMC1Q8NDZ2 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.05■□□□□ 0.48
SIMC1Q8NDZ2 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.05■□□□□ 0.48
SIMC1Q8NDZ2 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.05■□□□□ 0.48
SIMC1Q8NDZ2 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SIMC1Q8NDZ2 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.05■□□□□ 0.48
SIMC1Q8NDZ2 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.05■□□□□ 0.48
SIMC1Q8NDZ2 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
SIMC1Q8NDZ2 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.05■□□□□ 0.48
SIMC1Q8NDZ2 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SIMC1Q8NDZ2 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.05■□□□□ 0.48
SIMC1Q8NDZ2 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
SIMC1Q8NDZ2 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms