Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.49■□□□□ 0.55
LINC01555Q8NAE3 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LINC01555Q8NAE3 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.49■□□□□ 0.55
LINC01555Q8NAE3 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LINC01555Q8NAE3 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LINC01555Q8NAE3 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.49■□□□□ 0.55
LINC01555Q8NAE3 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LINC01555Q8NAE3 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LINC01555Q8NAE3 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LINC01555Q8NAE3 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LINC01555Q8NAE3 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
LINC01555Q8NAE3 MMP23A-201ENST00000234610 1017 ntBASIC18.48■□□□□ 0.55
LINC01555Q8NAE3 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LINC01555Q8NAE3 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
LINC01555Q8NAE3 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LINC01555Q8NAE3 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.48■□□□□ 0.55
LINC01555Q8NAE3 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
LINC01555Q8NAE3 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LINC01555Q8NAE3 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.48■□□□□ 0.55
LINC01555Q8NAE3 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
LINC01555Q8NAE3 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
LINC01555Q8NAE3 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.48■□□□□ 0.55
LINC01555Q8NAE3 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
LINC01555Q8NAE3 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
LINC01555Q8NAE3 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LINC01555Q8NAE3 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
LINC01555Q8NAE3 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LINC01555Q8NAE3 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LINC01555Q8NAE3 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LINC01555Q8NAE3 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.47■□□□□ 0.55
LINC01555Q8NAE3 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LINC01555Q8NAE3 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LINC01555Q8NAE3 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LINC01555Q8NAE3 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LINC01555Q8NAE3 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LINC01555Q8NAE3 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LINC01555Q8NAE3 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.47■□□□□ 0.55
LINC01555Q8NAE3 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.47■□□□□ 0.55
LINC01555Q8NAE3 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LINC01555Q8NAE3 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.47■□□□□ 0.55
LINC01555Q8NAE3 PRSS44-201ENST00000515154 1146 ntBASIC18.47■□□□□ 0.55
LINC01555Q8NAE3 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.47■□□□□ 0.55
LINC01555Q8NAE3 AC073912.3-201ENST00000624414 853 ntBASIC18.47■□□□□ 0.55
LINC01555Q8NAE3 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.47■□□□□ 0.55
LINC01555Q8NAE3 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LINC01555Q8NAE3 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LINC01555Q8NAE3 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LINC01555Q8NAE3 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.47■□□□□ 0.55
LINC01555Q8NAE3 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LINC01555Q8NAE3 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LINC01555Q8NAE3 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.47■□□□□ 0.55
LINC01555Q8NAE3 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.47■□□□□ 0.55
LINC01555Q8NAE3 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.47■□□□□ 0.55
LINC01555Q8NAE3 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LINC01555Q8NAE3 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LINC01555Q8NAE3 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LINC01555Q8NAE3 CYP2D8P-201ENST00000433633 1490 ntBASIC18.46■□□□□ 0.55
LINC01555Q8NAE3 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LINC01555Q8NAE3 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
LINC01555Q8NAE3 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LINC01555Q8NAE3 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.46■□□□□ 0.55
LINC01555Q8NAE3 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
LINC01555Q8NAE3 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
LINC01555Q8NAE3 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.46■□□□□ 0.55
LINC01555Q8NAE3 AC087499.1-201ENST00000418141 1075 ntBASIC18.46■□□□□ 0.55
LINC01555Q8NAE3 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.46■□□□□ 0.55
LINC01555Q8NAE3 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.46■□□□□ 0.55
LINC01555Q8NAE3 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LINC01555Q8NAE3 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.46■□□□□ 0.55
LINC01555Q8NAE3 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LINC01555Q8NAE3 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
LINC01555Q8NAE3 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.46■□□□□ 0.55
LINC01555Q8NAE3 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LINC01555Q8NAE3 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.46■□□□□ 0.55
LINC01555Q8NAE3 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.46■□□□□ 0.55
LINC01555Q8NAE3 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.46■□□□□ 0.55
LINC01555Q8NAE3 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
LINC01555Q8NAE3 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
LINC01555Q8NAE3 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LINC01555Q8NAE3 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
LINC01555Q8NAE3 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.45■□□□□ 0.54
LINC01555Q8NAE3 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
LINC01555Q8NAE3 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LINC01555Q8NAE3 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LINC01555Q8NAE3 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LINC01555Q8NAE3 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.45■□□□□ 0.54
LINC01555Q8NAE3 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.45■□□□□ 0.54
LINC01555Q8NAE3 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
LINC01555Q8NAE3 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
LINC01555Q8NAE3 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LINC01555Q8NAE3 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LINC01555Q8NAE3 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LINC01555Q8NAE3 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LINC01555Q8NAE3 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LINC01555Q8NAE3 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
LINC01555Q8NAE3 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
LINC01555Q8NAE3 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.45■□□□□ 0.54
LINC01555Q8NAE3 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LINC01555Q8NAE3 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
LINC01555Q8NAE3 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms