Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.75■□□□□ 0.43
VRK2Q86Y07 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VRK2Q86Y07 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
VRK2Q86Y07 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VRK2Q86Y07 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
VRK2Q86Y07 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.74■□□□□ 0.43
VRK2Q86Y07 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.74■□□□□ 0.43
VRK2Q86Y07 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
VRK2Q86Y07 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VRK2Q86Y07 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
VRK2Q86Y07 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
VRK2Q86Y07 MTDHP1-201ENST00000605323 784 ntBASIC17.74■□□□□ 0.43
VRK2Q86Y07 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
VRK2Q86Y07 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.74■□□□□ 0.43
VRK2Q86Y07 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VRK2Q86Y07 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
VRK2Q86Y07 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
VRK2Q86Y07 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.74■□□□□ 0.43
VRK2Q86Y07 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VRK2Q86Y07 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.74■□□□□ 0.43
VRK2Q86Y07 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
VRK2Q86Y07 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
VRK2Q86Y07 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VRK2Q86Y07 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VRK2Q86Y07 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.74■□□□□ 0.43
VRK2Q86Y07 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VRK2Q86Y07 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VRK2Q86Y07 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VRK2Q86Y07 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VRK2Q86Y07 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
VRK2Q86Y07 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
VRK2Q86Y07 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
VRK2Q86Y07 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VRK2Q86Y07 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VRK2Q86Y07 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
VRK2Q86Y07 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VRK2Q86Y07 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VRK2Q86Y07 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
VRK2Q86Y07 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
VRK2Q86Y07 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
VRK2Q86Y07 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC17.73■□□□□ 0.43
VRK2Q86Y07 KRT18P6-201ENST00000555540 1265 ntBASIC17.73■□□□□ 0.43
VRK2Q86Y07 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.73■□□□□ 0.43
VRK2Q86Y07 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
VRK2Q86Y07 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
VRK2Q86Y07 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.73■□□□□ 0.43
VRK2Q86Y07 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
VRK2Q86Y07 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VRK2Q86Y07 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
VRK2Q86Y07 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
VRK2Q86Y07 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
VRK2Q86Y07 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
VRK2Q86Y07 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
VRK2Q86Y07 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VRK2Q86Y07 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
VRK2Q86Y07 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
VRK2Q86Y07 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.72■□□□□ 0.43
VRK2Q86Y07 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.72■□□□□ 0.43
VRK2Q86Y07 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VRK2Q86Y07 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
VRK2Q86Y07 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.72■□□□□ 0.43
VRK2Q86Y07 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VRK2Q86Y07 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
VRK2Q86Y07 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VRK2Q86Y07 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.72■□□□□ 0.43
VRK2Q86Y07 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
VRK2Q86Y07 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VRK2Q86Y07 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VRK2Q86Y07 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
VRK2Q86Y07 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
VRK2Q86Y07 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
VRK2Q86Y07 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
VRK2Q86Y07 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VRK2Q86Y07 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC17.72■□□□□ 0.43
VRK2Q86Y07 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
VRK2Q86Y07 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC17.72■□□□□ 0.43
VRK2Q86Y07 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC17.72■□□□□ 0.43
VRK2Q86Y07 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.72■□□□□ 0.43
VRK2Q86Y07 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VRK2Q86Y07 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VRK2Q86Y07 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
VRK2Q86Y07 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.72■□□□□ 0.43
VRK2Q86Y07 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VRK2Q86Y07 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
VRK2Q86Y07 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
VRK2Q86Y07 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.71■□□□□ 0.43
VRK2Q86Y07 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.71■□□□□ 0.43
VRK2Q86Y07 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
VRK2Q86Y07 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
VRK2Q86Y07 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.71■□□□□ 0.43
VRK2Q86Y07 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VRK2Q86Y07 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.71■□□□□ 0.43
VRK2Q86Y07 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
VRK2Q86Y07 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VRK2Q86Y07 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.71■□□□□ 0.43
VRK2Q86Y07 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.71■□□□□ 0.43
VRK2Q86Y07 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.71■□□□□ 0.43
VRK2Q86Y07 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VRK2Q86Y07 MMAB-206ENST00000540016 945 ntTSL 3 BASIC17.71■□□□□ 0.43
VRK2Q86Y07 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms