Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.32■□□□□ 0.36
RTL6Q6ICC9 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RTL6Q6ICC9 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.32■□□□□ 0.36
RTL6Q6ICC9 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTL6Q6ICC9 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.32■□□□□ 0.36
RTL6Q6ICC9 ARMC10P1-201ENST00000313754 855 ntBASIC17.32■□□□□ 0.36
RTL6Q6ICC9 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RTL6Q6ICC9 AC091390.4-202ENST00000476426 537 ntBASIC17.32■□□□□ 0.36
RTL6Q6ICC9 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTL6Q6ICC9 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.32■□□□□ 0.36
RTL6Q6ICC9 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
RTL6Q6ICC9 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTL6Q6ICC9 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTL6Q6ICC9 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTL6Q6ICC9 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTL6Q6ICC9 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RTL6Q6ICC9 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTL6Q6ICC9 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTL6Q6ICC9 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTL6Q6ICC9 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RTL6Q6ICC9 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTL6Q6ICC9 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
RTL6Q6ICC9 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.32■□□□□ 0.36
RTL6Q6ICC9 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTL6Q6ICC9 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTL6Q6ICC9 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
RTL6Q6ICC9 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTL6Q6ICC9 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
RTL6Q6ICC9 AFG3L1P-217ENST00000557444 2447 ntBASIC17.31■□□□□ 0.36
RTL6Q6ICC9 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTL6Q6ICC9 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTL6Q6ICC9 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.31■□□□□ 0.36
RTL6Q6ICC9 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTL6Q6ICC9 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTL6Q6ICC9 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RTL6Q6ICC9 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTL6Q6ICC9 AC138932.1-201ENST00000534164 6830 ntBASIC17.31■□□□□ 0.36
RTL6Q6ICC9 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTL6Q6ICC9 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.31■□□□□ 0.36
RTL6Q6ICC9 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.31■□□□□ 0.36
RTL6Q6ICC9 FAM207BP-201ENST00000447172 505 ntBASIC17.31■□□□□ 0.36
RTL6Q6ICC9 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.31■□□□□ 0.36
RTL6Q6ICC9 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RTL6Q6ICC9 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
RTL6Q6ICC9 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
RTL6Q6ICC9 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.31■□□□□ 0.36
RTL6Q6ICC9 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
RTL6Q6ICC9 FAM87A-204ENST00000613235 858 ntBASIC17.31■□□□□ 0.36
RTL6Q6ICC9 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RTL6Q6ICC9 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTL6Q6ICC9 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTL6Q6ICC9 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.31■□□□□ 0.36
RTL6Q6ICC9 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
RTL6Q6ICC9 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RTL6Q6ICC9 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RTL6Q6ICC9 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
RTL6Q6ICC9 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
RTL6Q6ICC9 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.3■□□□□ 0.36
RTL6Q6ICC9 AC096733.2-201ENST00000609937 1394 ntBASIC17.3■□□□□ 0.36
RTL6Q6ICC9 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
RTL6Q6ICC9 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RTL6Q6ICC9 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RTL6Q6ICC9 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RTL6Q6ICC9 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.3■□□□□ 0.36
RTL6Q6ICC9 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.3■□□□□ 0.36
RTL6Q6ICC9 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.3■□□□□ 0.36
RTL6Q6ICC9 MFAP1P1-201ENST00000442257 1255 ntBASIC17.3■□□□□ 0.36
RTL6Q6ICC9 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.3■□□□□ 0.36
RTL6Q6ICC9 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RTL6Q6ICC9 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.3■□□□□ 0.36
RTL6Q6ICC9 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.3■□□□□ 0.36
RTL6Q6ICC9 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
RTL6Q6ICC9 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RTL6Q6ICC9 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RTL6Q6ICC9 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
RTL6Q6ICC9 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.3■□□□□ 0.36
RTL6Q6ICC9 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
RTL6Q6ICC9 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RTL6Q6ICC9 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RTL6Q6ICC9 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.29■□□□□ 0.36
RTL6Q6ICC9 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.29■□□□□ 0.36
RTL6Q6ICC9 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.29■□□□□ 0.36
RTL6Q6ICC9 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RTL6Q6ICC9 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RTL6Q6ICC9 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RTL6Q6ICC9 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.29■□□□□ 0.36
RTL6Q6ICC9 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RTL6Q6ICC9 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.29■□□□□ 0.36
RTL6Q6ICC9 AC128688.1-201ENST00000487626 519 ntBASIC17.29■□□□□ 0.36
RTL6Q6ICC9 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.29■□□□□ 0.36
RTL6Q6ICC9 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.29■□□□□ 0.36
RTL6Q6ICC9 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.29■□□□□ 0.36
RTL6Q6ICC9 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.29■□□□□ 0.36
RTL6Q6ICC9 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
RTL6Q6ICC9 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RTL6Q6ICC9 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RTL6Q6ICC9 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.29■□□□□ 0.36
RTL6Q6ICC9 AL691432.2-201ENST00000607222 2038 ntBASIC17.29■□□□□ 0.36
RTL6Q6ICC9 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17.29■□□□□ 0.36
RTL6Q6ICC9 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms