Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
SHROOM1Q2M3G4 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC22.43■■□□□ 1.18
SHROOM1Q2M3G4 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC22.43■■□□□ 1.18
SHROOM1Q2M3G4 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC22.43■■□□□ 1.18
SHROOM1Q2M3G4 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SHROOM1Q2M3G4 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC22.43■■□□□ 1.18
SHROOM1Q2M3G4 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC22.43■■□□□ 1.18
SHROOM1Q2M3G4 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC22.43■■□□□ 1.18
SHROOM1Q2M3G4 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
SHROOM1Q2M3G4 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
SHROOM1Q2M3G4 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SHROOM1Q2M3G4 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SHROOM1Q2M3G4 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
SHROOM1Q2M3G4 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC22.42■■□□□ 1.18
SHROOM1Q2M3G4 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC22.42■■□□□ 1.18
SHROOM1Q2M3G4 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC22.42■■□□□ 1.18
SHROOM1Q2M3G4 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
SHROOM1Q2M3G4 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SHROOM1Q2M3G4 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SHROOM1Q2M3G4 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
SHROOM1Q2M3G4 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SHROOM1Q2M3G4 COPS8-203ENST00000409334 794 ntTSL 5 BASIC22.42■■□□□ 1.18
SHROOM1Q2M3G4 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC22.42■■□□□ 1.18
SHROOM1Q2M3G4 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
SHROOM1Q2M3G4 SNX5-210ENST00000481323 562 ntTSL 3 BASIC22.42■■□□□ 1.18
SHROOM1Q2M3G4 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
SHROOM1Q2M3G4 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
SHROOM1Q2M3G4 CD320-202ENST00000537716 1119 ntTSL 2 BASIC22.42■■□□□ 1.18
SHROOM1Q2M3G4 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC22.42■■□□□ 1.18
SHROOM1Q2M3G4 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC22.42■■□□□ 1.18
SHROOM1Q2M3G4 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC22.42■■□□□ 1.18
SHROOM1Q2M3G4 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
SHROOM1Q2M3G4 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SHROOM1Q2M3G4 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
SHROOM1Q2M3G4 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC22.42■■□□□ 1.18
SHROOM1Q2M3G4 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
SHROOM1Q2M3G4 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SHROOM1Q2M3G4 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC22.41■■□□□ 1.18
SHROOM1Q2M3G4 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC22.41■■□□□ 1.18
SHROOM1Q2M3G4 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SHROOM1Q2M3G4 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SHROOM1Q2M3G4 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC22.41■■□□□ 1.18
SHROOM1Q2M3G4 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
SHROOM1Q2M3G4 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC22.41■■□□□ 1.18
SHROOM1Q2M3G4 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
SHROOM1Q2M3G4 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC22.41■■□□□ 1.18
SHROOM1Q2M3G4 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC22.41■■□□□ 1.18
SHROOM1Q2M3G4 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC22.41■■□□□ 1.18
SHROOM1Q2M3G4 GCSHP2-201ENST00000560971 527 ntBASIC22.41■■□□□ 1.18
SHROOM1Q2M3G4 LINC01238-205ENST00000567549 1107 ntBASIC22.41■■□□□ 1.18
SHROOM1Q2M3G4 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC22.41■■□□□ 1.18
SHROOM1Q2M3G4 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC22.41■■□□□ 1.18
SHROOM1Q2M3G4 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC22.41■■□□□ 1.18
SHROOM1Q2M3G4 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SHROOM1Q2M3G4 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC22.41■■□□□ 1.18
SHROOM1Q2M3G4 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
SHROOM1Q2M3G4 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SHROOM1Q2M3G4 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC22.41■■□□□ 1.18
SHROOM1Q2M3G4 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SHROOM1Q2M3G4 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
SHROOM1Q2M3G4 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
SHROOM1Q2M3G4 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
SHROOM1Q2M3G4 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SHROOM1Q2M3G4 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
SHROOM1Q2M3G4 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC22.4■■□□□ 1.18
SHROOM1Q2M3G4 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC22.4■■□□□ 1.18
SHROOM1Q2M3G4 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC22.4■■□□□ 1.18
SHROOM1Q2M3G4 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC22.4■■□□□ 1.18
SHROOM1Q2M3G4 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
SHROOM1Q2M3G4 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SHROOM1Q2M3G4 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
SHROOM1Q2M3G4 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC22.4■■□□□ 1.18
SHROOM1Q2M3G4 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SHROOM1Q2M3G4 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
SHROOM1Q2M3G4 AL671277.2-201ENST00000458060 996 ntBASIC22.4■■□□□ 1.18
SHROOM1Q2M3G4 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC22.4■■□□□ 1.18
SHROOM1Q2M3G4 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC22.4■■□□□ 1.18
SHROOM1Q2M3G4 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC22.4■■□□□ 1.18
SHROOM1Q2M3G4 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
SHROOM1Q2M3G4 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC22.4■■□□□ 1.18
SHROOM1Q2M3G4 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SHROOM1Q2M3G4 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC22.4■■□□□ 1.18
SHROOM1Q2M3G4 AC140113.3-201ENST00000605663 199 ntBASIC22.4■■□□□ 1.18
SHROOM1Q2M3G4 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC22.4■■□□□ 1.18
SHROOM1Q2M3G4 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC22.4■■□□□ 1.18
SHROOM1Q2M3G4 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC22.4■■□□□ 1.18
SHROOM1Q2M3G4 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
SHROOM1Q2M3G4 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
SHROOM1Q2M3G4 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
SHROOM1Q2M3G4 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC22.4■■□□□ 1.18
SHROOM1Q2M3G4 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC22.4■■□□□ 1.18
SHROOM1Q2M3G4 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.18
SHROOM1Q2M3G4 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.18
SHROOM1Q2M3G4 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
SHROOM1Q2M3G4 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
SHROOM1Q2M3G4 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
SHROOM1Q2M3G4 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC22.39■■□□□ 1.18
SHROOM1Q2M3G4 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC22.39■■□□□ 1.17
SHROOM1Q2M3G4 GOLGA6L5P-202ENST00000515341 1828 ntBASIC22.39■■□□□ 1.17
SHROOM1Q2M3G4 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms