Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.49■□□□□ 0.55
HMGCS1Q01581 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.49■□□□□ 0.55
HMGCS1Q01581 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HMGCS1Q01581 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
HMGCS1Q01581 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.49■□□□□ 0.55
HMGCS1Q01581 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.49■□□□□ 0.55
HMGCS1Q01581 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.49■□□□□ 0.55
HMGCS1Q01581 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
HMGCS1Q01581 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HMGCS1Q01581 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HMGCS1Q01581 IRX1P1-201ENST00000438849 1838 ntBASIC18.49■□□□□ 0.55
HMGCS1Q01581 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HMGCS1Q01581 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
HMGCS1Q01581 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
HMGCS1Q01581 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
HMGCS1Q01581 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HMGCS1Q01581 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
HMGCS1Q01581 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HMGCS1Q01581 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
HMGCS1Q01581 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.48■□□□□ 0.55
HMGCS1Q01581 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HMGCS1Q01581 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HMGCS1Q01581 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HMGCS1Q01581 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.48■□□□□ 0.55
HMGCS1Q01581 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.48■□□□□ 0.55
HMGCS1Q01581 RNA5SP413-201ENST00000516373 109 ntBASIC18.48■□□□□ 0.55
HMGCS1Q01581 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HMGCS1Q01581 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.48■□□□□ 0.55
HMGCS1Q01581 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.48■□□□□ 0.55
HMGCS1Q01581 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.48■□□□□ 0.55
HMGCS1Q01581 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HMGCS1Q01581 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HMGCS1Q01581 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HMGCS1Q01581 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
HMGCS1Q01581 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
HMGCS1Q01581 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HMGCS1Q01581 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
HMGCS1Q01581 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.48■□□□□ 0.55
HMGCS1Q01581 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HMGCS1Q01581 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HMGCS1Q01581 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HMGCS1Q01581 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HMGCS1Q01581 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.47■□□□□ 0.55
HMGCS1Q01581 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HMGCS1Q01581 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HMGCS1Q01581 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.47■□□□□ 0.55
HMGCS1Q01581 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.47■□□□□ 0.55
HMGCS1Q01581 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
HMGCS1Q01581 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HMGCS1Q01581 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
HMGCS1Q01581 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
HMGCS1Q01581 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
HMGCS1Q01581 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HMGCS1Q01581 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HMGCS1Q01581 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HMGCS1Q01581 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.47■□□□□ 0.55
HMGCS1Q01581 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HMGCS1Q01581 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.47■□□□□ 0.55
HMGCS1Q01581 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.47■□□□□ 0.55
HMGCS1Q01581 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HMGCS1Q01581 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.47■□□□□ 0.55
HMGCS1Q01581 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HMGCS1Q01581 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
HMGCS1Q01581 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.47■□□□□ 0.55
HMGCS1Q01581 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
HMGCS1Q01581 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HMGCS1Q01581 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.47■□□□□ 0.55
HMGCS1Q01581 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HMGCS1Q01581 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
HMGCS1Q01581 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HMGCS1Q01581 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HMGCS1Q01581 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HMGCS1Q01581 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HMGCS1Q01581 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HMGCS1Q01581 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.46■□□□□ 0.55
HMGCS1Q01581 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.46■□□□□ 0.55
HMGCS1Q01581 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
HMGCS1Q01581 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
HMGCS1Q01581 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
HMGCS1Q01581 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HMGCS1Q01581 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.46■□□□□ 0.55
HMGCS1Q01581 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HMGCS1Q01581 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.46■□□□□ 0.55
HMGCS1Q01581 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.46■□□□□ 0.55
HMGCS1Q01581 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.46■□□□□ 0.55
HMGCS1Q01581 PRKY-204ENST00000533551 1019 ntBASIC18.46■□□□□ 0.55
HMGCS1Q01581 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.46■□□□□ 0.55
HMGCS1Q01581 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
HMGCS1Q01581 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HMGCS1Q01581 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
HMGCS1Q01581 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
HMGCS1Q01581 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HMGCS1Q01581 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HMGCS1Q01581 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
HMGCS1Q01581 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HMGCS1Q01581 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HMGCS1Q01581 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
HMGCS1Q01581 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
HMGCS1Q01581 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HMGCS1Q01581 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms