Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
IRX4P78413 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.92■□□□□ 0.78
IRX4P78413 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
IRX4P78413 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
IRX4P78413 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
IRX4P78413 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
IRX4P78413 AP000974.1-201ENST00000623909 2387 ntBASIC19.92■□□□□ 0.78
IRX4P78413 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
IRX4P78413 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
IRX4P78413 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
IRX4P78413 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
IRX4P78413 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
IRX4P78413 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.91■□□□□ 0.78
IRX4P78413 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
IRX4P78413 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
IRX4P78413 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
IRX4P78413 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
IRX4P78413 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
IRX4P78413 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
IRX4P78413 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.91■□□□□ 0.78
IRX4P78413 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
IRX4P78413 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
IRX4P78413 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
IRX4P78413 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
IRX4P78413 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.91■□□□□ 0.78
IRX4P78413 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.91■□□□□ 0.78
IRX4P78413 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.91■□□□□ 0.78
IRX4P78413 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.91■□□□□ 0.78
IRX4P78413 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
IRX4P78413 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.91■□□□□ 0.78
IRX4P78413 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.91■□□□□ 0.78
IRX4P78413 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.91■□□□□ 0.78
IRX4P78413 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.91■□□□□ 0.78
IRX4P78413 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
IRX4P78413 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
IRX4P78413 AP000525.1-201ENST00000608286 694 ntBASIC19.91■□□□□ 0.78
IRX4P78413 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
IRX4P78413 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
IRX4P78413 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
IRX4P78413 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.91■□□□□ 0.78
IRX4P78413 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.91■□□□□ 0.78
IRX4P78413 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
IRX4P78413 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
IRX4P78413 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
IRX4P78413 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.91■□□□□ 0.78
IRX4P78413 TMEM179-206ENST00000616017 1645 ntBASIC19.91■□□□□ 0.78
IRX4P78413 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
IRX4P78413 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
IRX4P78413 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
IRX4P78413 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.9■□□□□ 0.78
IRX4P78413 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
IRX4P78413 RNF146-204ENST00000476956 884 ntTSL 2 BASIC19.9■□□□□ 0.78
IRX4P78413 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.9■□□□□ 0.78
IRX4P78413 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.9■□□□□ 0.78
IRX4P78413 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
IRX4P78413 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.9■□□□□ 0.78
IRX4P78413 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.9■□□□□ 0.78
IRX4P78413 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
IRX4P78413 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
IRX4P78413 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
IRX4P78413 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.9■□□□□ 0.78
IRX4P78413 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
IRX4P78413 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
IRX4P78413 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.9■□□□□ 0.78
IRX4P78413 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
IRX4P78413 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
IRX4P78413 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
IRX4P78413 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
IRX4P78413 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.9■□□□□ 0.78
IRX4P78413 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.9■□□□□ 0.78
IRX4P78413 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
IRX4P78413 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.9■□□□□ 0.78
IRX4P78413 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.9■□□□□ 0.78
IRX4P78413 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
IRX4P78413 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
IRX4P78413 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.89■□□□□ 0.78
IRX4P78413 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
IRX4P78413 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.78
IRX4P78413 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
IRX4P78413 UNC93B2-201ENST00000285383 730 ntBASIC19.89■□□□□ 0.77
IRX4P78413 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
IRX4P78413 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.89■□□□□ 0.77
IRX4P78413 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.89■□□□□ 0.77
IRX4P78413 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.89■□□□□ 0.77
IRX4P78413 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
IRX4P78413 MIR1238-201ENST00000408483 83 ntBASIC19.89■□□□□ 0.77
IRX4P78413 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
IRX4P78413 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.89■□□□□ 0.77
IRX4P78413 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.89■□□□□ 0.77
IRX4P78413 KRT18P57-201ENST00000443599 1254 ntBASIC19.89■□□□□ 0.77
IRX4P78413 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.89■□□□□ 0.77
IRX4P78413 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
IRX4P78413 NUDT16P1-203ENST00000513809 620 ntBASIC19.89■□□□□ 0.77
IRX4P78413 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
IRX4P78413 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
IRX4P78413 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.89■□□□□ 0.77
IRX4P78413 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
IRX4P78413 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
IRX4P78413 REXO1L10P-201ENST00000615707 1290 ntBASIC19.89■□□□□ 0.77
IRX4P78413 AC124283.5-201ENST00000624661 1809 ntBASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms