Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RAE1P78406 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RAE1P78406 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.22■□□□□ 0.51
RAE1P78406 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.22■□□□□ 0.51
RAE1P78406 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.22■□□□□ 0.51
RAE1P78406 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
RAE1P78406 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
RAE1P78406 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.22■□□□□ 0.51
RAE1P78406 TSPY23P-201ENST00000440136 739 ntBASIC18.22■□□□□ 0.51
RAE1P78406 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.22■□□□□ 0.51
RAE1P78406 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.22■□□□□ 0.51
RAE1P78406 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.22■□□□□ 0.51
RAE1P78406 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.22■□□□□ 0.51
RAE1P78406 AC110285.5-201ENST00000611501 352 ntBASIC18.22■□□□□ 0.51
RAE1P78406 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.22■□□□□ 0.51
RAE1P78406 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RAE1P78406 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RAE1P78406 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.22■□□□□ 0.51
RAE1P78406 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
RAE1P78406 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
RAE1P78406 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.22■□□□□ 0.51
RAE1P78406 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RAE1P78406 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.21■□□□□ 0.51
RAE1P78406 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.21■□□□□ 0.51
RAE1P78406 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAE1P78406 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAE1P78406 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAE1P78406 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAE1P78406 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAE1P78406 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RAE1P78406 POU5F1P3-201ENST00000428824 1078 ntBASIC18.21■□□□□ 0.51
RAE1P78406 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.21■□□□□ 0.51
RAE1P78406 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.21■□□□□ 0.51
RAE1P78406 Z85996.1-201ENST00000494644 937 ntBASIC18.21■□□□□ 0.51
RAE1P78406 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.21■□□□□ 0.51
RAE1P78406 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
RAE1P78406 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.21■□□□□ 0.51
RAE1P78406 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.21■□□□□ 0.51
RAE1P78406 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.21■□□□□ 0.51
RAE1P78406 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAE1P78406 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAE1P78406 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.21■□□□□ 0.51
RAE1P78406 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RAE1P78406 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.21■□□□□ 0.51
RAE1P78406 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAE1P78406 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.21■□□□□ 0.5
RAE1P78406 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAE1P78406 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAE1P78406 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAE1P78406 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.2■□□□□ 0.5
RAE1P78406 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAE1P78406 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.2■□□□□ 0.5
RAE1P78406 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAE1P78406 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAE1P78406 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAE1P78406 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAE1P78406 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAE1P78406 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
RAE1P78406 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.2■□□□□ 0.5
RAE1P78406 TSPY21P-201ENST00000433481 731 ntBASIC18.2■□□□□ 0.5
RAE1P78406 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.2■□□□□ 0.5
RAE1P78406 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.2■□□□□ 0.5
RAE1P78406 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.2■□□□□ 0.5
RAE1P78406 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAE1P78406 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RAE1P78406 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.2■□□□□ 0.5
RAE1P78406 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.2■□□□□ 0.5
RAE1P78406 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAE1P78406 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
RAE1P78406 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAE1P78406 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAE1P78406 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.2■□□□□ 0.5
RAE1P78406 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAE1P78406 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.2■□□□□ 0.5
RAE1P78406 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAE1P78406 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAE1P78406 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAE1P78406 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RAE1P78406 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAE1P78406 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RAE1P78406 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.19■□□□□ 0.5
RAE1P78406 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RAE1P78406 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.19■□□□□ 0.5
RAE1P78406 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.19■□□□□ 0.5
RAE1P78406 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAE1P78406 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RAE1P78406 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RAE1P78406 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAE1P78406 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.19■□□□□ 0.5
RAE1P78406 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
RAE1P78406 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RAE1P78406 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAE1P78406 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.19■□□□□ 0.5
RAE1P78406 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.19■□□□□ 0.5
RAE1P78406 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.19■□□□□ 0.5
RAE1P78406 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RAE1P78406 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RAE1P78406 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.19■□□□□ 0.5
RAE1P78406 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.19■□□□□ 0.5
RAE1P78406 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms