Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HIST1H3AP68431 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HIST1H3AP68431 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.78■□□□□ 0.28
HIST1H3AP68431 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HIST1H3AP68431 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
HIST1H3AP68431 TSPY21P-201ENST00000433481 731 ntBASIC16.78■□□□□ 0.28
HIST1H3AP68431 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC16.78■□□□□ 0.28
HIST1H3AP68431 AL353708.3-201ENST00000610272 989 ntBASIC16.78■□□□□ 0.28
HIST1H3AP68431 MMD2-204ENST00000612910 778 ntTSL 5 BASIC16.78■□□□□ 0.28
HIST1H3AP68431 AL445675.2-201ENST00000620291 557 ntBASIC16.78■□□□□ 0.28
HIST1H3AP68431 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HIST1H3AP68431 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HIST1H3AP68431 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
HIST1H3AP68431 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
HIST1H3AP68431 AL049812.1-201ENST00000432563 2267 ntBASIC16.77■□□□□ 0.28
HIST1H3AP68431 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HIST1H3AP68431 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
HIST1H3AP68431 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HIST1H3AP68431 KRT8P41-201ENST00000533985 1514 ntBASIC16.77■□□□□ 0.28
HIST1H3AP68431 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HIST1H3AP68431 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HIST1H3AP68431 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
HIST1H3AP68431 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HIST1H3AP68431 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
HIST1H3AP68431 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC16.77■□□□□ 0.28
HIST1H3AP68431 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
HIST1H3AP68431 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HIST1H3AP68431 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
HIST1H3AP68431 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
HIST1H3AP68431 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC16.77■□□□□ 0.27
HIST1H3AP68431 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
HIST1H3AP68431 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
HIST1H3AP68431 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC16.77■□□□□ 0.27
HIST1H3AP68431 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
HIST1H3AP68431 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HIST1H3AP68431 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC16.76■□□□□ 0.27
HIST1H3AP68431 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC16.76■□□□□ 0.27
HIST1H3AP68431 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HIST1H3AP68431 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
HIST1H3AP68431 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
HIST1H3AP68431 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HIST1H3AP68431 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HIST1H3AP68431 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC16.76■□□□□ 0.27
HIST1H3AP68431 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC16.76■□□□□ 0.27
HIST1H3AP68431 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC16.76■□□□□ 0.27
HIST1H3AP68431 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HIST1H3AP68431 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
HIST1H3AP68431 Z85996.1-201ENST00000494644 937 ntBASIC16.76■□□□□ 0.27
HIST1H3AP68431 RPPH1-201ENST00000516869 333 ntBASIC16.76■□□□□ 0.27
HIST1H3AP68431 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC16.76■□□□□ 0.27
HIST1H3AP68431 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC16.76■□□□□ 0.27
HIST1H3AP68431 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
HIST1H3AP68431 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HIST1H3AP68431 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC16.76■□□□□ 0.27
HIST1H3AP68431 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
HIST1H3AP68431 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HIST1H3AP68431 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HIST1H3AP68431 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC16.76■□□□□ 0.27
HIST1H3AP68431 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
HIST1H3AP68431 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HIST1H3AP68431 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC16.75■□□□□ 0.27
HIST1H3AP68431 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC16.75■□□□□ 0.27
HIST1H3AP68431 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
HIST1H3AP68431 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HIST1H3AP68431 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HIST1H3AP68431 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HIST1H3AP68431 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HIST1H3AP68431 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HIST1H3AP68431 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC16.75■□□□□ 0.27
HIST1H3AP68431 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
HIST1H3AP68431 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC16.75■□□□□ 0.27
HIST1H3AP68431 NIFKP9-201ENST00000419265 221 ntBASIC16.75■□□□□ 0.27
HIST1H3AP68431 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC16.75■□□□□ 0.27
HIST1H3AP68431 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HIST1H3AP68431 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
HIST1H3AP68431 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC16.75■□□□□ 0.27
HIST1H3AP68431 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC16.75■□□□□ 0.27
HIST1H3AP68431 C1QBPP2-201ENST00000528754 825 ntBASIC16.75■□□□□ 0.27
HIST1H3AP68431 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC16.75■□□□□ 0.27
HIST1H3AP68431 RNF121-214ENST00000533380 870 ntTSL 3 BASIC16.75■□□□□ 0.27
HIST1H3AP68431 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC16.75■□□□□ 0.27
HIST1H3AP68431 ITM2C-210ENST00000620962 501 ntBASIC16.75■□□□□ 0.27
HIST1H3AP68431 CABP2-204ENST00000636477 941 ntTSL 5 BASIC16.75■□□□□ 0.27
HIST1H3AP68431 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HIST1H3AP68431 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC16.75■□□□□ 0.27
HIST1H3AP68431 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HIST1H3AP68431 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HIST1H3AP68431 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HIST1H3AP68431 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
HIST1H3AP68431 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC16.75■□□□□ 0.27
HIST1H3AP68431 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HIST1H3AP68431 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HIST1H3AP68431 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HIST1H3AP68431 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
HIST1H3AP68431 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HIST1H3AP68431 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC16.75■□□□□ 0.27
HIST1H3AP68431 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC16.75■□□□□ 0.27
HIST1H3AP68431 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HIST1H3AP68431 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HIST1H3AP68431 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms