Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SEC61A1P61619 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SEC61A1P61619 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
SEC61A1P61619 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SEC61A1P61619 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC16.77■□□□□ 0.27
SEC61A1P61619 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
SEC61A1P61619 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
SEC61A1P61619 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SEC61A1P61619 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SEC61A1P61619 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC16.77■□□□□ 0.27
SEC61A1P61619 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SEC61A1P61619 TREX1-205ENST00000625293 1783 ntBASIC16.77■□□□□ 0.27
SEC61A1P61619 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SEC61A1P61619 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SEC61A1P61619 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC16.77■□□□□ 0.27
SEC61A1P61619 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SEC61A1P61619 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SEC61A1P61619 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SEC61A1P61619 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SEC61A1P61619 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SEC61A1P61619 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC16.76■□□□□ 0.27
SEC61A1P61619 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SEC61A1P61619 PCDHB18P-201ENST00000524813 2368 ntBASIC16.76■□□□□ 0.27
SEC61A1P61619 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SEC61A1P61619 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SEC61A1P61619 AL158047.1-201ENST00000445918 881 ntBASIC16.76■□□□□ 0.27
SEC61A1P61619 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SEC61A1P61619 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
SEC61A1P61619 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC16.76■□□□□ 0.27
SEC61A1P61619 AL032819.2-201ENST00000624543 2162 ntBASIC16.76■□□□□ 0.27
SEC61A1P61619 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SEC61A1P61619 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SEC61A1P61619 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
SEC61A1P61619 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SEC61A1P61619 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SEC61A1P61619 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SEC61A1P61619 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SEC61A1P61619 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SEC61A1P61619 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SEC61A1P61619 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SEC61A1P61619 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SEC61A1P61619 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
SEC61A1P61619 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.76■□□□□ 0.27
SEC61A1P61619 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SEC61A1P61619 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SEC61A1P61619 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SEC61A1P61619 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC16.75■□□□□ 0.27
SEC61A1P61619 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC16.75■□□□□ 0.27
SEC61A1P61619 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
SEC61A1P61619 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SEC61A1P61619 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
SEC61A1P61619 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SEC61A1P61619 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC16.75■□□□□ 0.27
SEC61A1P61619 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SEC61A1P61619 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SEC61A1P61619 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SEC61A1P61619 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SEC61A1P61619 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
SEC61A1P61619 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC16.75■□□□□ 0.27
SEC61A1P61619 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SEC61A1P61619 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC16.75■□□□□ 0.27
SEC61A1P61619 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC16.75■□□□□ 0.27
SEC61A1P61619 GCSHP5-201ENST00000443090 522 ntBASIC16.75■□□□□ 0.27
SEC61A1P61619 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC16.75■□□□□ 0.27
SEC61A1P61619 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC16.75■□□□□ 0.27
SEC61A1P61619 AC005829.2-201ENST00000571422 1056 ntBASIC16.75■□□□□ 0.27
SEC61A1P61619 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
SEC61A1P61619 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
SEC61A1P61619 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
SEC61A1P61619 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC16.75■□□□□ 0.27
SEC61A1P61619 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.75■□□□□ 0.27
SEC61A1P61619 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
SEC61A1P61619 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.75■□□□□ 0.27
SEC61A1P61619 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SEC61A1P61619 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SEC61A1P61619 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SEC61A1P61619 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.74■□□□□ 0.27
SEC61A1P61619 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SEC61A1P61619 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SEC61A1P61619 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.74■□□□□ 0.27
SEC61A1P61619 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC16.74■□□□□ 0.27
SEC61A1P61619 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SEC61A1P61619 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.74■□□□□ 0.27
SEC61A1P61619 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SEC61A1P61619 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
SEC61A1P61619 BX119927.1-201ENST00000636596 1552 ntBASIC16.74■□□□□ 0.27
SEC61A1P61619 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SEC61A1P61619 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SEC61A1P61619 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SEC61A1P61619 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SEC61A1P61619 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SEC61A1P61619 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
SEC61A1P61619 KRT17P3-201ENST00000420566 1262 ntBASIC16.74■□□□□ 0.27
SEC61A1P61619 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC16.74■□□□□ 0.27
SEC61A1P61619 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SEC61A1P61619 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
SEC61A1P61619 DET1-205ENST00000558413 583 ntTSL 4 BASIC16.74■□□□□ 0.27
SEC61A1P61619 AC142381.4-202ENST00000563973 229 ntBASIC16.74■□□□□ 0.27
SEC61A1P61619 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC16.74■□□□□ 0.27
SEC61A1P61619 AC069544.1-201ENST00000609399 999 ntBASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms