Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.77■□□□□ 0.6
CDH13P55290 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDH13P55290 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDH13P55290 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDH13P55290 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CDH13P55290 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.59
CDH13P55290 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CDH13P55290 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CDH13P55290 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CDH13P55290 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CDH13P55290 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
CDH13P55290 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDH13P55290 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CDH13P55290 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.76■□□□□ 0.59
CDH13P55290 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.76■□□□□ 0.59
CDH13P55290 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDH13P55290 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDH13P55290 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.76■□□□□ 0.59
CDH13P55290 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDH13P55290 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDH13P55290 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CDH13P55290 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDH13P55290 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDH13P55290 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CDH13P55290 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CDH13P55290 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.76■□□□□ 0.59
CDH13P55290 TUBB8P6-201ENST00000436895 1288 ntBASIC18.76■□□□□ 0.59
CDH13P55290 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.76■□□□□ 0.59
CDH13P55290 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.76■□□□□ 0.59
CDH13P55290 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.76■□□□□ 0.59
CDH13P55290 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.76■□□□□ 0.59
CDH13P55290 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.76■□□□□ 0.59
CDH13P55290 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CDH13P55290 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CDH13P55290 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.76■□□□□ 0.59
CDH13P55290 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CDH13P55290 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CDH13P55290 IRX1P1-201ENST00000438849 1838 ntBASIC18.76■□□□□ 0.59
CDH13P55290 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.76■□□□□ 0.59
CDH13P55290 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CDH13P55290 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.76■□□□□ 0.59
CDH13P55290 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CDH13P55290 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDH13P55290 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDH13P55290 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CDH13P55290 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH13P55290 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH13P55290 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH13P55290 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH13P55290 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.75■□□□□ 0.59
CDH13P55290 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH13P55290 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CDH13P55290 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH13P55290 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
CDH13P55290 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
CDH13P55290 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.75■□□□□ 0.59
CDH13P55290 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CDH13P55290 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CDH13P55290 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.75■□□□□ 0.59
CDH13P55290 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.75■□□□□ 0.59
CDH13P55290 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.75■□□□□ 0.59
CDH13P55290 AC104771.1-201ENST00000603335 964 ntBASIC18.75■□□□□ 0.59
CDH13P55290 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
CDH13P55290 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
CDH13P55290 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH13P55290 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.75■□□□□ 0.59
CDH13P55290 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH13P55290 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.75■□□□□ 0.59
CDH13P55290 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH13P55290 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH13P55290 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CDH13P55290 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CDH13P55290 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH13P55290 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH13P55290 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH13P55290 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH13P55290 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH13P55290 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CDH13P55290 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH13P55290 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.74■□□□□ 0.59
CDH13P55290 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.74■□□□□ 0.59
CDH13P55290 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.74■□□□□ 0.59
CDH13P55290 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH13P55290 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.74■□□□□ 0.59
CDH13P55290 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CDH13P55290 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CDH13P55290 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH13P55290 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH13P55290 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
CDH13P55290 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.74■□□□□ 0.59
CDH13P55290 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.74■□□□□ 0.59
CDH13P55290 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
CDH13P55290 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CDH13P55290 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.74■□□□□ 0.59
CDH13P55290 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.74■□□□□ 0.59
CDH13P55290 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CDH13P55290 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH13P55290 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
CDH13P55290 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.74■□□□□ 0.59
CDH13P55290 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms