Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CDH4P55283 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.64■□□□□ 0.73
CDH4P55283 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
CDH4P55283 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.64■□□□□ 0.73
CDH4P55283 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.64■□□□□ 0.73
CDH4P55283 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.64■□□□□ 0.73
CDH4P55283 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.73
CDH4P55283 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDH4P55283 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDH4P55283 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDH4P55283 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.63■□□□□ 0.73
CDH4P55283 AC093484.2-201ENST00000580996 2166 ntBASIC19.63■□□□□ 0.73
CDH4P55283 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDH4P55283 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.63■□□□□ 0.73
CDH4P55283 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.63■□□□□ 0.73
CDH4P55283 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CDH4P55283 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.63■□□□□ 0.73
CDH4P55283 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.63■□□□□ 0.73
CDH4P55283 AC010947.1-201ENST00000623454 693 ntBASIC19.63■□□□□ 0.73
CDH4P55283 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDH4P55283 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDH4P55283 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDH4P55283 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CDH4P55283 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDH4P55283 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.62■□□□□ 0.73
CDH4P55283 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CDH4P55283 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDH4P55283 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.62■□□□□ 0.73
CDH4P55283 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.62■□□□□ 0.73
CDH4P55283 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDH4P55283 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.62■□□□□ 0.73
CDH4P55283 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.62■□□□□ 0.73
CDH4P55283 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDH4P55283 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDH4P55283 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDH4P55283 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CDH4P55283 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
CDH4P55283 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.62■□□□□ 0.73
CDH4P55283 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDH4P55283 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.62■□□□□ 0.73
CDH4P55283 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDH4P55283 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC19.62■□□□□ 0.73
CDH4P55283 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.62■□□□□ 0.73
CDH4P55283 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.62■□□□□ 0.73
CDH4P55283 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CDH4P55283 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.62■□□□□ 0.73
CDH4P55283 LINC01023-201ENST00000606054 436 ntBASIC19.62■□□□□ 0.73
CDH4P55283 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
CDH4P55283 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDH4P55283 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CDH4P55283 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.62■□□□□ 0.73
CDH4P55283 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CDH4P55283 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.62■□□□□ 0.73
CDH4P55283 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDH4P55283 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
CDH4P55283 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDH4P55283 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.62■□□□□ 0.73
CDH4P55283 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDH4P55283 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDH4P55283 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDH4P55283 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CDH4P55283 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDH4P55283 TSPY14P-201ENST00000303979 915 ntBASIC19.61■□□□□ 0.73
CDH4P55283 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CDH4P55283 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.61■□□□□ 0.73
CDH4P55283 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.61■□□□□ 0.73
CDH4P55283 AC012306.2-201ENST00000609350 630 ntBASIC19.61■□□□□ 0.73
CDH4P55283 AC097493.4-201ENST00000641197 219 ntBASIC19.61■□□□□ 0.73
CDH4P55283 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDH4P55283 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.61■□□□□ 0.73
CDH4P55283 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.61■□□□□ 0.73
CDH4P55283 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CDH4P55283 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.61■□□□□ 0.73
CDH4P55283 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
CDH4P55283 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDH4P55283 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.6■□□□□ 0.73
CDH4P55283 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.6■□□□□ 0.73
CDH4P55283 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDH4P55283 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDH4P55283 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CDH4P55283 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CDH4P55283 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDH4P55283 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CDH4P55283 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDH4P55283 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
CDH4P55283 TEX21P-204ENST00000641479 1693 ntBASIC19.6■□□□□ 0.73
CDH4P55283 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.6■□□□□ 0.73
CDH4P55283 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CDH4P55283 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDH4P55283 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.6■□□□□ 0.73
CDH4P55283 CA15P1-201ENST00000481698 905 ntBASIC19.6■□□□□ 0.73
CDH4P55283 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.6■□□□□ 0.73
CDH4P55283 EGLN1P1-201ENST00000531623 762 ntBASIC19.6■□□□□ 0.73
CDH4P55283 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CDH4P55283 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDH4P55283 AC145285.6-201ENST00000604632 637 ntBASIC19.6■□□□□ 0.73
CDH4P55283 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.6■□□□□ 0.73
CDH4P55283 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDH4P55283 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.6■□□□□ 0.73
CDH4P55283 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms