Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CACNA2D1P54289 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CACNA2D1P54289 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
CACNA2D1P54289 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
CACNA2D1P54289 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.34■□□□□ 0.85
CACNA2D1P54289 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
CACNA2D1P54289 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
CACNA2D1P54289 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.34■□□□□ 0.85
CACNA2D1P54289 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CACNA2D1P54289 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CACNA2D1P54289 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CACNA2D1P54289 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.34■□□□□ 0.85
CACNA2D1P54289 FAM207BP-201ENST00000447172 505 ntBASIC20.34■□□□□ 0.85
CACNA2D1P54289 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.34■□□□□ 0.85
CACNA2D1P54289 SLC25A1P4-201ENST00000567977 778 ntBASIC20.34■□□□□ 0.85
CACNA2D1P54289 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.34■□□□□ 0.85
CACNA2D1P54289 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.34■□□□□ 0.85
CACNA2D1P54289 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CACNA2D1P54289 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CACNA2D1P54289 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CACNA2D1P54289 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CACNA2D1P54289 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CACNA2D1P54289 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.33■□□□□ 0.85
CACNA2D1P54289 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CACNA2D1P54289 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CACNA2D1P54289 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CACNA2D1P54289 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CACNA2D1P54289 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CACNA2D1P54289 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CACNA2D1P54289 CRYGFP-201ENST00000418459 633 ntBASIC20.33■□□□□ 0.85
CACNA2D1P54289 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC20.33■□□□□ 0.85
CACNA2D1P54289 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.33■□□□□ 0.85
CACNA2D1P54289 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CACNA2D1P54289 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.33■□□□□ 0.85
CACNA2D1P54289 LINC01023-201ENST00000606054 436 ntBASIC20.33■□□□□ 0.85
CACNA2D1P54289 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.33■□□□□ 0.85
CACNA2D1P54289 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CACNA2D1P54289 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CACNA2D1P54289 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
CACNA2D1P54289 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CACNA2D1P54289 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.33■□□□□ 0.84
CACNA2D1P54289 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CACNA2D1P54289 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.32■□□□□ 0.84
CACNA2D1P54289 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.32■□□□□ 0.84
CACNA2D1P54289 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
CACNA2D1P54289 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.32■□□□□ 0.84
CACNA2D1P54289 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CACNA2D1P54289 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.32■□□□□ 0.84
CACNA2D1P54289 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CACNA2D1P54289 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CACNA2D1P54289 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.32■□□□□ 0.84
CACNA2D1P54289 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC20.32■□□□□ 0.84
CACNA2D1P54289 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CACNA2D1P54289 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CACNA2D1P54289 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CACNA2D1P54289 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.32■□□□□ 0.84
CACNA2D1P54289 AP005242.2-201ENST00000580065 1175 ntBASIC20.32■□□□□ 0.84
CACNA2D1P54289 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.32■□□□□ 0.84
CACNA2D1P54289 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CACNA2D1P54289 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.32■□□□□ 0.84
CACNA2D1P54289 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CACNA2D1P54289 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.32■□□□□ 0.84
CACNA2D1P54289 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CACNA2D1P54289 Z82202.1-201ENST00000623446 1880 ntBASIC20.32■□□□□ 0.84
CACNA2D1P54289 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.31■□□□□ 0.84
CACNA2D1P54289 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.31■□□□□ 0.84
CACNA2D1P54289 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CACNA2D1P54289 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CACNA2D1P54289 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CACNA2D1P54289 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CACNA2D1P54289 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CACNA2D1P54289 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CACNA2D1P54289 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.31■□□□□ 0.84
CACNA2D1P54289 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.31■□□□□ 0.84
CACNA2D1P54289 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC20.31■□□□□ 0.84
CACNA2D1P54289 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC20.31■□□□□ 0.84
CACNA2D1P54289 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CACNA2D1P54289 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.31■□□□□ 0.84
CACNA2D1P54289 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CACNA2D1P54289 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.31■□□□□ 0.84
CACNA2D1P54289 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.31■□□□□ 0.84
CACNA2D1P54289 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CACNA2D1P54289 AC096733.2-201ENST00000609937 1394 ntBASIC20.31■□□□□ 0.84
CACNA2D1P54289 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.31■□□□□ 0.84
CACNA2D1P54289 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
CACNA2D1P54289 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CACNA2D1P54289 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CACNA2D1P54289 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CACNA2D1P54289 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CACNA2D1P54289 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CACNA2D1P54289 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CACNA2D1P54289 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CACNA2D1P54289 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
CACNA2D1P54289 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.3■□□□□ 0.84
CACNA2D1P54289 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.3■□□□□ 0.84
CACNA2D1P54289 INGX-201ENST00000359239 846 ntBASIC20.3■□□□□ 0.84
CACNA2D1P54289 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
CACNA2D1P54289 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC20.3■□□□□ 0.84
CACNA2D1P54289 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC20.3■□□□□ 0.84
CACNA2D1P54289 MFAP1P1-201ENST00000442257 1255 ntBASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms