Protein–RNA interactions for Protein: P51861

CDR1, Cerebellar degeneration-related antigen 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1P51861 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDR1P51861 AC099778.1-201ENST00000568593 1911 ntBASIC20.96■□□□□ 0.95
CDR1P51861 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CDR1P51861 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.96■□□□□ 0.95
CDR1P51861 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
CDR1P51861 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC20.95■□□□□ 0.94
CDR1P51861 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDR1P51861 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDR1P51861 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDR1P51861 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDR1P51861 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDR1P51861 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CDR1P51861 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CDR1P51861 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC20.95■□□□□ 0.94
CDR1P51861 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDR1P51861 KRT16P5-201ENST00000455284 522 ntBASIC20.95■□□□□ 0.94
CDR1P51861 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.95■□□□□ 0.94
CDR1P51861 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.95■□□□□ 0.94
CDR1P51861 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CDR1P51861 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDR1P51861 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CDR1P51861 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.95■□□□□ 0.94
CDR1P51861 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CDR1P51861 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDR1P51861 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CDR1P51861 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CDR1P51861 AC120498.9-201ENST00000339021 3867 ntBASIC20.95■□□□□ 0.94
CDR1P51861 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDR1P51861 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDR1P51861 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDR1P51861 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.94■□□□□ 0.94
CDR1P51861 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
CDR1P51861 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.94■□□□□ 0.94
CDR1P51861 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDR1P51861 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDR1P51861 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CDR1P51861 PHGDH-210ENST00000641115 1638 ntBASIC20.94■□□□□ 0.94
CDR1P51861 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDR1P51861 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDR1P51861 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDR1P51861 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CDR1P51861 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDR1P51861 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CDR1P51861 GXYLT1P3-201ENST00000453058 1193 ntBASIC20.94■□□□□ 0.94
CDR1P51861 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.94■□□□□ 0.94
CDR1P51861 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.94■□□□□ 0.94
CDR1P51861 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.94■□□□□ 0.94
CDR1P51861 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.94■□□□□ 0.94
CDR1P51861 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDR1P51861 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CDR1P51861 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
CDR1P51861 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.94■□□□□ 0.94
CDR1P51861 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CDR1P51861 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.94■□□□□ 0.94
CDR1P51861 AP006587.1-201ENST00000534129 1502 ntBASIC20.94■□□□□ 0.94
CDR1P51861 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.93■□□□□ 0.94
CDR1P51861 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.93■□□□□ 0.94
CDR1P51861 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CDR1P51861 AC116351.2-201ENST00000606540 1585 ntBASIC20.93■□□□□ 0.94
CDR1P51861 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
CDR1P51861 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CDR1P51861 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CDR1P51861 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDR1P51861 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.93■□□□□ 0.94
CDR1P51861 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
CDR1P51861 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDR1P51861 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CDR1P51861 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.93■□□□□ 0.94
CDR1P51861 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDR1P51861 AL355075.4-201ENST00000554988 638 ntBASIC20.93■□□□□ 0.94
CDR1P51861 RARRES2P10-201ENST00000564312 460 ntBASIC20.93■□□□□ 0.94
CDR1P51861 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDR1P51861 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CDR1P51861 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.93■□□□□ 0.94
CDR1P51861 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CDR1P51861 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDR1P51861 TFP1-202ENST00000475455 1573 ntBASIC20.93■□□□□ 0.94
CDR1P51861 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CDR1P51861 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CDR1P51861 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDR1P51861 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.92■□□□□ 0.94
CDR1P51861 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.92■□□□□ 0.94
CDR1P51861 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDR1P51861 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
CDR1P51861 ECEL1P3-201ENST00000427961 737 ntBASIC20.92■□□□□ 0.94
CDR1P51861 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.92■□□□□ 0.94
CDR1P51861 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.92■□□□□ 0.94
CDR1P51861 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.92■□□□□ 0.94
CDR1P51861 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.92■□□□□ 0.94
CDR1P51861 CD177P1-201ENST00000606252 935 ntBASIC20.92■□□□□ 0.94
CDR1P51861 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CDR1P51861 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDR1P51861 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDR1P51861 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDR1P51861 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CDR1P51861 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CDR1P51861 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDR1P51861 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CDR1P51861 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
CDR1P51861 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms