Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
CLCNKAP51800 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CLCNKAP51800 CRYGFP-201ENST00000418459 633 ntBASIC18.83■□□□□ 0.6
CLCNKAP51800 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.83■□□□□ 0.6
CLCNKAP51800 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.83■□□□□ 0.6
CLCNKAP51800 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.83■□□□□ 0.6
CLCNKAP51800 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CLCNKAP51800 C2orf69P3-201ENST00000565542 1120 ntBASIC18.83■□□□□ 0.6
CLCNKAP51800 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CLCNKAP51800 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.83■□□□□ 0.6
CLCNKAP51800 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.83■□□□□ 0.6
CLCNKAP51800 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLCNKAP51800 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CLCNKAP51800 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLCNKAP51800 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLCNKAP51800 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLCNKAP51800 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
CLCNKAP51800 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.83■□□□□ 0.6
CLCNKAP51800 CYP2D8P-201ENST00000433633 1490 ntBASIC18.83■□□□□ 0.6
CLCNKAP51800 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLCNKAP51800 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CLCNKAP51800 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CLCNKAP51800 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLCNKAP51800 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.82■□□□□ 0.6
CLCNKAP51800 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CLCNKAP51800 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLCNKAP51800 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
CLCNKAP51800 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CLCNKAP51800 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.82■□□□□ 0.6
CLCNKAP51800 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLCNKAP51800 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.82■□□□□ 0.6
CLCNKAP51800 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLCNKAP51800 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.82■□□□□ 0.6
CLCNKAP51800 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.82■□□□□ 0.6
CLCNKAP51800 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.82■□□□□ 0.6
CLCNKAP51800 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.82■□□□□ 0.6
CLCNKAP51800 MFAP1P1-201ENST00000442257 1255 ntBASIC18.82■□□□□ 0.6
CLCNKAP51800 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.82■□□□□ 0.6
CLCNKAP51800 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.82■□□□□ 0.6
CLCNKAP51800 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.82■□□□□ 0.6
CLCNKAP51800 EGLN1P1-201ENST00000531623 762 ntBASIC18.82■□□□□ 0.6
CLCNKAP51800 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLCNKAP51800 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLCNKAP51800 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLCNKAP51800 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLCNKAP51800 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CLCNKAP51800 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.82■□□□□ 0.6
CLCNKAP51800 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLCNKAP51800 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLCNKAP51800 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLCNKAP51800 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLCNKAP51800 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CLCNKAP51800 SDHAP1-207ENST00000440850 2000 ntBASIC18.81■□□□□ 0.6
CLCNKAP51800 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.81■□□□□ 0.6
CLCNKAP51800 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLCNKAP51800 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.81■□□□□ 0.6
CLCNKAP51800 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.81■□□□□ 0.6
CLCNKAP51800 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.81■□□□□ 0.6
CLCNKAP51800 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.81■□□□□ 0.6
CLCNKAP51800 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CLCNKAP51800 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLCNKAP51800 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.81■□□□□ 0.6
CLCNKAP51800 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLCNKAP51800 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLCNKAP51800 LINC01568-207ENST00000641790 1380 ntBASIC18.81■□□□□ 0.6
CLCNKAP51800 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.8■□□□□ 0.6
CLCNKAP51800 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLCNKAP51800 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.8■□□□□ 0.6
CLCNKAP51800 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLCNKAP51800 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CLCNKAP51800 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
CLCNKAP51800 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CLCNKAP51800 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLCNKAP51800 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLCNKAP51800 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.8■□□□□ 0.6
CLCNKAP51800 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.8■□□□□ 0.6
CLCNKAP51800 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLCNKAP51800 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLCNKAP51800 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
CLCNKAP51800 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CLCNKAP51800 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
CLCNKAP51800 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.8■□□□□ 0.6
CLCNKAP51800 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLCNKAP51800 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CLCNKAP51800 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CLCNKAP51800 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.8■□□□□ 0.6
CLCNKAP51800 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.8■□□□□ 0.6
CLCNKAP51800 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLCNKAP51800 PRSS44-201ENST00000515154 1146 ntBASIC18.8■□□□□ 0.6
CLCNKAP51800 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CLCNKAP51800 CKBP1-201ENST00000565489 1086 ntBASIC18.8■□□□□ 0.6
CLCNKAP51800 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.8■□□□□ 0.6
CLCNKAP51800 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.8■□□□□ 0.6
CLCNKAP51800 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
CLCNKAP51800 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLCNKAP51800 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLCNKAP51800 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CLCNKAP51800 KRT18P22-201ENST00000402024 1347 ntBASIC18.79■□□□□ 0.6
CLCNKAP51800 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CLCNKAP51800 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms