Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.29■□□□□ 0.68
CCNFP41002 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.29■□□□□ 0.68
CCNFP41002 AC008403.3-201ENST00000598924 454 ntBASIC19.29■□□□□ 0.68
CCNFP41002 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.29■□□□□ 0.68
CCNFP41002 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCNFP41002 FP475955.4-201ENST00000623131 1990 ntBASIC19.29■□□□□ 0.68
CCNFP41002 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCNFP41002 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.29■□□□□ 0.68
CCNFP41002 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
CCNFP41002 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCNFP41002 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
CCNFP41002 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCNFP41002 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCNFP41002 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCNFP41002 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCNFP41002 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCNFP41002 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.29■□□□□ 0.68
CCNFP41002 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCNFP41002 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCNFP41002 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CCNFP41002 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.28■□□□□ 0.68
CCNFP41002 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CCNFP41002 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.28■□□□□ 0.68
CCNFP41002 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.28■□□□□ 0.68
CCNFP41002 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.28■□□□□ 0.68
CCNFP41002 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCNFP41002 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCNFP41002 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.28■□□□□ 0.68
CCNFP41002 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.28■□□□□ 0.68
CCNFP41002 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCNFP41002 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCNFP41002 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.28■□□□□ 0.68
CCNFP41002 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.28■□□□□ 0.68
CCNFP41002 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCNFP41002 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.28■□□□□ 0.68
CCNFP41002 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCNFP41002 ESRRAP1-201ENST00000400596 1257 ntBASIC19.28■□□□□ 0.68
CCNFP41002 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.28■□□□□ 0.68
CCNFP41002 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCNFP41002 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.28■□□□□ 0.68
CCNFP41002 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
CCNFP41002 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.28■□□□□ 0.68
CCNFP41002 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCNFP41002 AL121829.2-201ENST00000620908 328 ntBASIC19.28■□□□□ 0.68
CCNFP41002 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.28■□□□□ 0.68
CCNFP41002 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCNFP41002 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCNFP41002 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.28■□□□□ 0.68
CCNFP41002 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.28■□□□□ 0.68
CCNFP41002 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCNFP41002 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCNFP41002 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCNFP41002 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCNFP41002 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCNFP41002 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCNFP41002 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCNFP41002 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
CCNFP41002 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.27■□□□□ 0.68
CCNFP41002 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.27■□□□□ 0.68
CCNFP41002 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCNFP41002 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCNFP41002 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCNFP41002 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.27■□□□□ 0.68
CCNFP41002 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
CCNFP41002 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCNFP41002 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCNFP41002 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCNFP41002 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCNFP41002 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCNFP41002 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CCNFP41002 AC104581.1-202ENST00000635932 2618 ntBASIC19.27■□□□□ 0.68
CCNFP41002 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCNFP41002 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.27■□□□□ 0.68
CCNFP41002 AC079598.2-202ENST00000546624 1451 ntBASIC19.27■□□□□ 0.67
CCNFP41002 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CCNFP41002 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CCNFP41002 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.67
CCNFP41002 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
CCNFP41002 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CCNFP41002 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
CCNFP41002 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCNFP41002 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCNFP41002 AC005332.8-201ENST00000622750 2735 ntBASIC19.26■□□□□ 0.67
CCNFP41002 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCNFP41002 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCNFP41002 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCNFP41002 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.26■□□□□ 0.67
CCNFP41002 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CCNFP41002 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.26■□□□□ 0.67
CCNFP41002 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.26■□□□□ 0.67
CCNFP41002 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.26■□□□□ 0.67
CCNFP41002 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.26■□□□□ 0.67
CCNFP41002 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.26■□□□□ 0.67
CCNFP41002 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCNFP41002 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.26■□□□□ 0.67
CCNFP41002 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCNFP41002 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.26■□□□□ 0.67
CCNFP41002 AC104417.2-201ENST00000562989 1793 ntBASIC19.26■□□□□ 0.67
CCNFP41002 Z98044.1-201ENST00000632503 1764 ntBASIC19.26■□□□□ 0.67
CCNFP41002 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms