Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.55■□□□□ 0.4
RFC3P40938 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.55■□□□□ 0.4
RFC3P40938 EGLN1P1-201ENST00000531623 762 ntBASIC17.55■□□□□ 0.4
RFC3P40938 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RFC3P40938 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.55■□□□□ 0.4
RFC3P40938 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.55■□□□□ 0.4
RFC3P40938 AL445228.2-201ENST00000605589 952 ntBASIC17.55■□□□□ 0.4
RFC3P40938 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
RFC3P40938 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFC3P40938 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFC3P40938 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFC3P40938 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RFC3P40938 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
RFC3P40938 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.55■□□□□ 0.4
RFC3P40938 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
RFC3P40938 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
RFC3P40938 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFC3P40938 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFC3P40938 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFC3P40938 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
RFC3P40938 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RFC3P40938 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
RFC3P40938 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.54■□□□□ 0.4
RFC3P40938 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
RFC3P40938 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RFC3P40938 TSPY14P-201ENST00000303979 915 ntBASIC17.54■□□□□ 0.4
RFC3P40938 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RFC3P40938 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.54■□□□□ 0.4
RFC3P40938 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
RFC3P40938 LIN28AP1-201ENST00000429574 405 ntBASIC17.54■□□□□ 0.4
RFC3P40938 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.54■□□□□ 0.4
RFC3P40938 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.54■□□□□ 0.4
RFC3P40938 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RFC3P40938 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.54■□□□□ 0.4
RFC3P40938 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.54■□□□□ 0.4
RFC3P40938 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RFC3P40938 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.54■□□□□ 0.4
RFC3P40938 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RFC3P40938 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
RFC3P40938 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RFC3P40938 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RFC3P40938 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
RFC3P40938 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RFC3P40938 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC17.54■□□□□ 0.4
RFC3P40938 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RFC3P40938 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RFC3P40938 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RFC3P40938 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.53■□□□□ 0.4
RFC3P40938 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RFC3P40938 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.53■□□□□ 0.4
RFC3P40938 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RFC3P40938 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RFC3P40938 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RFC3P40938 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RFC3P40938 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.53■□□□□ 0.4
RFC3P40938 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
RFC3P40938 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.53■□□□□ 0.4
RFC3P40938 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.53■□□□□ 0.4
RFC3P40938 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.53■□□□□ 0.4
RFC3P40938 KRT18P35-201ENST00000510488 1269 ntBASIC17.53■□□□□ 0.4
RFC3P40938 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RFC3P40938 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.53■□□□□ 0.4
RFC3P40938 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
RFC3P40938 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.53■□□□□ 0.4
RFC3P40938 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
RFC3P40938 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RFC3P40938 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RFC3P40938 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
RFC3P40938 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.53■□□□□ 0.4
RFC3P40938 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RFC3P40938 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
RFC3P40938 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC17.52■□□□□ 0.4
RFC3P40938 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RFC3P40938 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RFC3P40938 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
RFC3P40938 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RFC3P40938 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.52■□□□□ 0.4
RFC3P40938 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RFC3P40938 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RFC3P40938 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
RFC3P40938 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.52■□□□□ 0.4
RFC3P40938 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RFC3P40938 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.52■□□□□ 0.4
RFC3P40938 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.52■□□□□ 0.4
RFC3P40938 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.52■□□□□ 0.4
RFC3P40938 FAM87A-204ENST00000613235 858 ntBASIC17.52■□□□□ 0.4
RFC3P40938 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RFC3P40938 AC073508.3-201ENST00000619697 1419 ntBASIC17.52■□□□□ 0.4
RFC3P40938 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
RFC3P40938 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.52■□□□□ 0.39
RFC3P40938 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RFC3P40938 AC096733.2-201ENST00000609937 1394 ntBASIC17.52■□□□□ 0.39
RFC3P40938 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.52■□□□□ 0.39
RFC3P40938 KRT8P41-201ENST00000533985 1514 ntBASIC17.52■□□□□ 0.39
RFC3P40938 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
RFC3P40938 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RFC3P40938 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.52■□□□□ 0.39
RFC3P40938 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RFC3P40938 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RFC3P40938 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms