Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
HMGCLP35914 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.13■□□□□ 0.65
HMGCLP35914 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.13■□□□□ 0.65
HMGCLP35914 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
HMGCLP35914 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HMGCLP35914 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.13■□□□□ 0.65
HMGCLP35914 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HMGCLP35914 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.13■□□□□ 0.65
HMGCLP35914 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HMGCLP35914 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HMGCLP35914 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HMGCLP35914 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
HMGCLP35914 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HMGCLP35914 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HMGCLP35914 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HMGCLP35914 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.12■□□□□ 0.65
HMGCLP35914 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HMGCLP35914 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HMGCLP35914 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.12■□□□□ 0.65
HMGCLP35914 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.12■□□□□ 0.65
HMGCLP35914 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HMGCLP35914 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HMGCLP35914 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.12■□□□□ 0.65
HMGCLP35914 KRT17P2-201ENST00000300992 1314 ntBASIC19.12■□□□□ 0.65
HMGCLP35914 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HMGCLP35914 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HMGCLP35914 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HMGCLP35914 FAM207BP-201ENST00000447172 505 ntBASIC19.12■□□□□ 0.65
HMGCLP35914 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.12■□□□□ 0.65
HMGCLP35914 AP000692.2-201ENST00000608391 879 ntBASIC19.12■□□□□ 0.65
HMGCLP35914 DGCR10-201ENST00000609839 495 ntBASIC19.12■□□□□ 0.65
HMGCLP35914 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HMGCLP35914 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HMGCLP35914 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HMGCLP35914 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.12■□□□□ 0.65
HMGCLP35914 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HMGCLP35914 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.11■□□□□ 0.65
HMGCLP35914 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.11■□□□□ 0.65
HMGCLP35914 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
HMGCLP35914 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
HMGCLP35914 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
HMGCLP35914 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
HMGCLP35914 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HMGCLP35914 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
HMGCLP35914 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HMGCLP35914 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HMGCLP35914 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HMGCLP35914 KRT8P11-201ENST00000409686 1436 ntBASIC19.11■□□□□ 0.65
HMGCLP35914 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HMGCLP35914 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.11■□□□□ 0.65
HMGCLP35914 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.11■□□□□ 0.65
HMGCLP35914 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HMGCLP35914 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.11■□□□□ 0.65
HMGCLP35914 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
HMGCLP35914 PRSS44-201ENST00000515154 1146 ntBASIC19.11■□□□□ 0.65
HMGCLP35914 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.11■□□□□ 0.65
HMGCLP35914 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.11■□□□□ 0.65
HMGCLP35914 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.11■□□□□ 0.65
HMGCLP35914 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.11■□□□□ 0.65
HMGCLP35914 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
HMGCLP35914 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.11■□□□□ 0.65
HMGCLP35914 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HMGCLP35914 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
HMGCLP35914 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
HMGCLP35914 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HMGCLP35914 FEM1AP3-201ENST00000403722 1741 ntBASIC19.11■□□□□ 0.65
HMGCLP35914 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.11■□□□□ 0.65
HMGCLP35914 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HMGCLP35914 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HMGCLP35914 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HMGCLP35914 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
HMGCLP35914 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HMGCLP35914 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HMGCLP35914 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.1■□□□□ 0.65
HMGCLP35914 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HMGCLP35914 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
HMGCLP35914 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.1■□□□□ 0.65
HMGCLP35914 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HMGCLP35914 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.1■□□□□ 0.65
HMGCLP35914 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.1■□□□□ 0.65
HMGCLP35914 IRX1P1-201ENST00000438849 1838 ntBASIC19.1■□□□□ 0.65
HMGCLP35914 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HMGCLP35914 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
HMGCLP35914 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HMGCLP35914 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
HMGCLP35914 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
HMGCLP35914 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HMGCLP35914 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.1■□□□□ 0.65
HMGCLP35914 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.1■□□□□ 0.65
HMGCLP35914 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HMGCLP35914 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HMGCLP35914 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HMGCLP35914 FP475955.4-201ENST00000623131 1990 ntBASIC19.1■□□□□ 0.65
HMGCLP35914 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HMGCLP35914 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HMGCLP35914 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HMGCLP35914 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HMGCLP35914 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HMGCLP35914 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.09■□□□□ 0.65
HMGCLP35914 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms