Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PTPN6P29350 AC233263.1-201ENST00000578059 224 ntBASIC18.21■□□□□ 0.51
PTPN6P29350 AC069544.1-201ENST00000609399 999 ntBASIC18.21■□□□□ 0.51
PTPN6P29350 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.21■□□□□ 0.51
PTPN6P29350 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTPN6P29350 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
PTPN6P29350 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTPN6P29350 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTPN6P29350 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.21■□□□□ 0.51
PTPN6P29350 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PTPN6P29350 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.21■□□□□ 0.5
PTPN6P29350 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTPN6P29350 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.2■□□□□ 0.5
PTPN6P29350 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.2■□□□□ 0.5
PTPN6P29350 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.2■□□□□ 0.5
PTPN6P29350 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTPN6P29350 AC009113.1-201ENST00000570267 2443 ntBASIC18.2■□□□□ 0.5
PTPN6P29350 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
PTPN6P29350 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTPN6P29350 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
PTPN6P29350 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
PTPN6P29350 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
PTPN6P29350 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PTPN6P29350 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTPN6P29350 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.2■□□□□ 0.5
PTPN6P29350 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.2■□□□□ 0.5
PTPN6P29350 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PTPN6P29350 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTPN6P29350 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PTPN6P29350 IRX1P1-201ENST00000438849 1838 ntBASIC18.2■□□□□ 0.5
PTPN6P29350 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PTPN6P29350 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTPN6P29350 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTPN6P29350 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTPN6P29350 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.2■□□□□ 0.5
PTPN6P29350 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.2■□□□□ 0.5
PTPN6P29350 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.2■□□□□ 0.5
PTPN6P29350 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTPN6P29350 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
PTPN6P29350 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTPN6P29350 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTPN6P29350 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTPN6P29350 AC104581.1-202ENST00000635932 2618 ntBASIC18.19■□□□□ 0.5
PTPN6P29350 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTPN6P29350 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PTPN6P29350 AP006587.1-201ENST00000534129 1502 ntBASIC18.19■□□□□ 0.5
PTPN6P29350 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTPN6P29350 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PTPN6P29350 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTPN6P29350 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTPN6P29350 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTPN6P29350 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.19■□□□□ 0.5
PTPN6P29350 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTPN6P29350 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.19■□□□□ 0.5
PTPN6P29350 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
PTPN6P29350 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
PTPN6P29350 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTPN6P29350 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
PTPN6P29350 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PTPN6P29350 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTPN6P29350 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
PTPN6P29350 AC098590.1-201ENST00000468126 897 ntBASIC18.19■□□□□ 0.5
PTPN6P29350 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
PTPN6P29350 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.19■□□□□ 0.5
PTPN6P29350 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.19■□□□□ 0.5
PTPN6P29350 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTPN6P29350 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.19■□□□□ 0.5
PTPN6P29350 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
PTPN6P29350 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTPN6P29350 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTPN6P29350 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTPN6P29350 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.19■□□□□ 0.5
PTPN6P29350 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
PTPN6P29350 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
PTPN6P29350 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
PTPN6P29350 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTPN6P29350 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTPN6P29350 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTPN6P29350 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTPN6P29350 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
PTPN6P29350 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.18■□□□□ 0.5
PTPN6P29350 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTPN6P29350 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTPN6P29350 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.18■□□□□ 0.5
PTPN6P29350 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PTPN6P29350 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.18■□□□□ 0.5
PTPN6P29350 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PTPN6P29350 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
PTPN6P29350 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PTPN6P29350 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.18■□□□□ 0.5
PTPN6P29350 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.18■□□□□ 0.5
PTPN6P29350 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTPN6P29350 AL121906.2-201ENST00000621597 723 ntBASIC18.18■□□□□ 0.5
PTPN6P29350 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
PTPN6P29350 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.18■□□□□ 0.5
PTPN6P29350 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTPN6P29350 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
PTPN6P29350 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PTPN6P29350 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTPN6P29350 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms